| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_31600 |
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| Symbol | csd2 |
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| ID | 7762060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 3268501 |
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| End bp | 3269409 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643806034 |
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| Product | CRISPR-associated protein Csd2 |
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| Protein accession | YP_002800298 |
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| Protein GI | 226945225 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3649] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR01595] CRISPR-associated protein, CT1132 family
[TIGR02589] CRISPR-associated protein, Csd2 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCGCCA TCGCCAACCG TTACGAATTT GTCTATCTGT TCGAAGTCAC CAACGGCAAC
CCGAATGGCG ATCCGGACGC CGGCAACCTG CCGCGCCTCG ACCCGGAAAC CAATCAGGGG
CTGGTCACGG ATGTCTGCCT CAAGCGCAAA ATCCGTAACT ATGTGGCACT GGAAAAGTCC
GATGCCGAAG GCAAGCCCGA GCAGAGTTAT GTCATCTACA TGCAGGAAAA GGCTGTGCTG
AACCAGCAGC ATGAGCAAGC CTGGAAAGCA TGCGAAATTC CGCCGGATGC CAAAAATGGC
TACAAGAAGT TGCCTGCCGA TACGGCCAAG GCCAAAAGCT TGACGGACTG GATGTGCAGT
AACTTCTTTG ATGTACGCGC CTTTGGCGCG GTGATGACGA CGGGTGTCAA CTGCGGTCAG
GTACGCGGGC CGATCCAACT GGCCTTTGCC ACCTCGATTG ATCCAATCAT CCCGCTGGAA
GTCTCCATTA CTCGTATGGC CGTGACCACC GAGAAGGAGG CAGAAGAGCA GAGCGGTGAC
AACCGCACCA TGGGCCGCAA GCACATCATC CCCTATGGCC TGTACCGCGC CCACGGCTTC
ATCTCCGCCA AGCTGGCCGA GCGTACCGGC TTCTCCGAGG ATGACCTTGC ACTGTTGTGG
CGGGCGCTGG AAAACATGTT CGAGCACGAC CGCTCGGCCG CACGCGGTGA AATGGCGGCG
CGCAAGCTGA TCGTGTTCAA GCATGAGCAT CCGATGGGCA ATGCGCCGGC ACACAAGTTG
TTCGATCTGG TCAAGGTGGC GCGCACGGAG GGCGAGGCCG ACACCCCGGC CCGCAGCTTT
GCCGACTATC AGATCAGCAT CGACCGTGAC GGGCTGCCAG CCGGAGTCAG CGTGCAGGAA
TACCTGTAA
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| Protein sequence | MSAIANRYEF VYLFEVTNGN PNGDPDAGNL PRLDPETNQG LVTDVCLKRK IRNYVALEKS
DAEGKPEQSY VIYMQEKAVL NQQHEQAWKA CEIPPDAKNG YKKLPADTAK AKSLTDWMCS
NFFDVRAFGA VMTTGVNCGQ VRGPIQLAFA TSIDPIIPLE VSITRMAVTT EKEAEEQSGD
NRTMGRKHII PYGLYRAHGF ISAKLAERTG FSEDDLALLW RALENMFEHD RSAARGEMAA
RKLIVFKHEH PMGNAPAHKL FDLVKVARTE GEADTPARSF ADYQISIDRD GLPAGVSVQE
YL
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