| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_31580 |
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| Symbol | cas1 |
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| ID | 7762058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 3266829 |
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| End bp | 3267869 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643806032 |
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| Product | CRISPR-associated protein Cas1 |
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| Protein accession | YP_002800296 |
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| Protein GI | 226945223 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03640] CRISPR-associated endonuclease Cas1, DVULG subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCGGC AACTCAACAC CCTGTATGTC ACCTCGGAAG GTGCCTGGCT GCGTAAGGAT
GGCGCAAACA TCGTCATGGA AATCGCCGGT GAAATTCGCG GCCGGATTCC GGTACACATG
CTGGAAAGCC TGGTCTGCAT CGGCCGGGTG CTAGTTTCCC CACCTTTGCT GGGCTATTGC
GCCGAGCAGG GCATCCGCAT CAGTTACCTG ACCCCCAATG GCAAATTCCT AGCCCGCGTC
GAAGGGCCGG TATCCGGTAA TGTGTTGCTG CGTCGCGAGC AGTACCGGCG CAGTGACGAT
CCGGCAGGCA GTGCCGCCAT CGTCGCCAAT CTGCTGGTCG GCAAGGTGTA CAACCAGCGC
GCCGTGATCG GCCGCGCCCT GCGTGATCAT GGCGACAAGC TGGCAGAGGA GGCGCGGATT
GCCCTGAACA TCACCCACAA GCGGTTGATG CGGATTGCCG ACCGCTTGTT GCTGGAGCAG
GACGTGGATG TGCTGCGTGG GTTGGAAGGG GAGGCAGCCC AGGCCTATTT CGGCGTGTTC
GATCACCTGA TCCGTGTGCC GGATGCCTCC TTGCGCTTCA GTGGCCGCAG CCGCCGGCCA
CCGCTGGATG CGGTCAATGC CCTGCTGTCG TTTCTCTACA CCCTGCTGAC CCACGACTGC
CGTTCGGCAC TGGAAACGGT CGGCCTCGAT CCGGCGGTCG GCTACCTGCA CCGCGACCGG
CCAGGCCGGC CGAGTCTGGC GCTGGATCTG GTCGAGGAGT TCCGTCCGGT ACTGGCCGAC
CGGCTGGCGC TGTCGCTGCT CAACCGGAGG CAACTGTCCG CTGCCGACTT CCAGACGCTG
GATAACGGTG CCGTGCTGCT GCGCGACGAA GCGCGCAAGC AGGTACTGAC AGCGTATCAG
GAGCGCAAAC GCGAAGAGCT GCGGCATGCC TTTCTGGAAG AGCAGGCTCC GCTCGGTTTG
TTCATGTTCA TCCAGGCGCA ACTGCTGGCC CGCCACCTGC GCGGCGATCT GGATGCCTAC
CCACCCTTCA TCTGGAAGTG A
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| Protein sequence | MRRQLNTLYV TSEGAWLRKD GANIVMEIAG EIRGRIPVHM LESLVCIGRV LVSPPLLGYC
AEQGIRISYL TPNGKFLARV EGPVSGNVLL RREQYRRSDD PAGSAAIVAN LLVGKVYNQR
AVIGRALRDH GDKLAEEARI ALNITHKRLM RIADRLLLEQ DVDVLRGLEG EAAQAYFGVF
DHLIRVPDAS LRFSGRSRRP PLDAVNALLS FLYTLLTHDC RSALETVGLD PAVGYLHRDR
PGRPSLALDL VEEFRPVLAD RLALSLLNRR QLSAADFQTL DNGAVLLRDE ARKQVLTAYQ
ERKREELRHA FLEEQAPLGL FMFIQAQLLA RHLRGDLDAY PPFIWK
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