Gene Avin_30550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_30550 
Symbol 
ID7761955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3164402 
End bp3165382 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content70% 
IMG OID643805931 
ProductD-isomer specific 2-hydroxyacid dehydrogenase 
Protein accessionYP_002800195 
Protein GI226945122 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA ACGTCTTCGT CTTCAGCCGC CTCGCTCCCG AGCATCAGGC GCGCCTGCGG 
CAGCACTTCA ACGTCAGCCT CCTCGACCCG GACGGCGACA TCGCCGCCCA GTACGCCGCG
GCGCTGCCCG AGGCCCACGG CCTGCTCGGC GTGGGCCGGC CCTTCGGCCG CGCCCAGTTG
GAGCCGGCCC GGCGACTGGA AGCGATCGCC AGCATCTCGG TGGGCTATGA CAACTACGAC
CTGACCTACC TCGACGAGCG TGACATCCTC CTCACCAATA CCCCGGACGT GCTCACCGAA
ACCACCGCGG ATCTGGGCTT CGCCCTGCTG ATGAGCGCCG CCCGCCGCGT CGCCGAACTC
GACGCCTGGG TCAAGGCCGG CCACTGGCAG GCAGCGGTCG GCCCGGCGCT GTTCGGCGGC
GACGTGCACG GCAAGACCCT CGGCATCCTC GGCCTCGGCA AGATCGGCGC GGCCATCGCC
CGGCGCGGAC GCTTCGGCTT CGGCATGCCG GTGATCTACC ACGGCAACGG CCGCAAGCCC
GAACTGGAAG CGGAACTCGG CGCCGGCTAC CGCAGCCTCG ACGAACTGCT CGGCGAGGCG
GATTTCGTCT GCGTGGTGGT CCCCCTGAGC GAACGCACCC GCCACCTGAT CGGCCGCCGC
GAACTGGCGC TGATGAAACC CTCGGCGATC CTGATCAACA TCGCCCGCGG TCCGGTGCTC
GACGAAGCGG CCCTGATCGA AGCCCTGCGG GACAGGCGCA TCCAGGCCGC CGGACTGGAC
GTCTATGAAA AGGAACCCCT CAAGGACTCG CCGCTGTTCG CCCTGCCCAA CGCGGTCACC
CTGCCGCACA TCGGCTCGGC GACCCACGAA ACCCGCCGGG CCATGGCCGA GCGGGCCATC
GACAACCTCG AACGCGCCCT GCTCGGCGGC ACCCCGCGGG ACATCGTCAA CCCGCAGGTC
TGGGCCCGTC GCCAGGCGTG A
 
Protein sequence
MKKNVFVFSR LAPEHQARLR QHFNVSLLDP DGDIAAQYAA ALPEAHGLLG VGRPFGRAQL 
EPARRLEAIA SISVGYDNYD LTYLDERDIL LTNTPDVLTE TTADLGFALL MSAARRVAEL
DAWVKAGHWQ AAVGPALFGG DVHGKTLGIL GLGKIGAAIA RRGRFGFGMP VIYHGNGRKP
ELEAELGAGY RSLDELLGEA DFVCVVVPLS ERTRHLIGRR ELALMKPSAI LINIARGPVL
DEAALIEALR DRRIQAAGLD VYEKEPLKDS PLFALPNAVT LPHIGSATHE TRRAMAERAI
DNLERALLGG TPRDIVNPQV WARRQA