Gene Avin_30220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_30220 
Symbol 
ID7761922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand- 
Start bp3129609 
End bp3130250 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content66% 
IMG OID643805894 
Producttransposase 
Protein accessionYP_002800162 
Protein GI226945089 
COG category[L] Replication, recombination and repair 
COG ID[COG3335] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACGTTT CTCGACCGGC ACGCCATGAC GTTCAAAAAA AGACCGCGCA GGCGGCCGAG 
CAGCAACGGC CGGACGTCCA GGCAGCCCGA CAGGGATGGA TCGAGGAGCA GTCCGGTTTC 
GATTGGCGCA AGCTGATCTT CGTCGACGAA ACCGCCGCTT CGACGAACCT GGCCCGCCTG 
CGGGGCTGGG CCCCTCGCGG CGAGCGCTGC CGGGCCGCGA TCCCCCACGG CCACTGGAAA 
ACCACGACCT TTACCGCCGG CCTGCGGCTG GATGGCCTGA GCGCGCCGCT GGTGCTCGAT 
GGCGCCATGA ACGGCCCGGT CTTCCTGGCC TATGTCGGGC AGGTTCTGGT ACCCGAGCTG 
ACGCCCGGCG ATATCGTGGT GATGGACAAC CTGCCGGCCC ACAAGGTGGC GGGGGTACGC 
CAGGCCATCG AAGGCGCAGG AGCCACACTG CGCTACCTGC CACCCTATAG CCCCGACCTG 
AACCCGATCG AGATGGCCTT CTCCAAGCTC AAGGCACTGC TGAGAAAGGC GGCGGCGCGG 
ACCGTGCCGG AGCTGTGGCA GAGCATTGGC GAGGCGATTG CGCAGTTCTC TGCACAGGAC 
TGCAGGCACT ACTTCGAGGC AGCCGGATAT GAATCGGGAT AA
 
Protein sequence
MDVSRPARHD VQKKTAQAAE QQRPDVQAAR QGWIEEQSGF DWRKLIFVDE TAASTNLARL 
RGWAPRGERC RAAIPHGHWK TTTFTAGLRL DGLSAPLVLD GAMNGPVFLA YVGQVLVPEL 
TPGDIVVMDN LPAHKVAGVR QAIEGAGATL RYLPPYSPDL NPIEMAFSKL KALLRKAAAR 
TVPELWQSIG EAIAQFSAQD CRHYFEAAGY ESG