Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_30200 |
Symbol | |
ID | 7761920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 3127568 |
End bp | 3128383 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643805892 |
Product | Xylose isomerase-type TIM-barrel protein |
Protein accession | YP_002800160 |
Protein GI | 226945087 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAAC GCATTCTGTC CCTGGCCGCC CTGACCGTGC TCGAACTGTC CCCGCCCGAC ATGGTGGAGG TGGCCGCCCG TGCCGGCTAC AGCCATGTCG GCCTGCGCCT GGTGCCGGCC ACCGCCGAGG AACACCATTT CCCCCTGGTC GCCGATGCCG GGTTGCGCCG GCAGACCCTG GCGCGCCTGC GCGATACCGG AATCGGGGTG TTCGACGTGG AAATCCTGCG CTTGAAGCCG GATACCCGCG TCGCCGATTT CGAAGTGATT CTCGCCGCCG GCGCCGAGCT GGGCGCAAGC GCGGTGCTGG TGGCCGGCAA CGATCCCGAC GAGGCGCGGC AGACCGACAA CTTCGCCGCC CTGTGCGATC TGGCGGCCGG TTTCGGCCTC GATCCGCACC TGGAGTTCAT GCCTTGGACC GACGCCCGCG ACCTGACCCA GGCCATGCGC ATCGTCGACA ACGCCGGACG CGCCAACGGC TGCGTGCTGG TCGACGCCTT CCATTTCGAC CGCTCCGCTT CGCACCTGGA GGATCTGGCC CGGCTCGACC CGGCACGCAT CCATTACGCG CAGTTGTGCG ACGTGGCCGG GCCGCGCCCG GACGACATGG ACGAGATCCT GCGCCAGGCG CGCAACGAGC GGCGCTTCCC CGGCGACGGC GATTGCGATC TGCCCGGCCT GTTGCGCGCC TTGCCGGCGA ACCTGCCGCT CAGCCTGGAA ATCCCCACCC GGCAGTTGCT CGAGCGGGGT GTCGGAGCCC TCGAACGCGC CCGGACCGCC ATCGACAAGG CCCGCGTCCT GCTGGCGCAG CTCTGA
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Protein sequence | MSERILSLAA LTVLELSPPD MVEVAARAGY SHVGLRLVPA TAEEHHFPLV ADAGLRRQTL ARLRDTGIGV FDVEILRLKP DTRVADFEVI LAAGAELGAS AVLVAGNDPD EARQTDNFAA LCDLAAGFGL DPHLEFMPWT DARDLTQAMR IVDNAGRANG CVLVDAFHFD RSASHLEDLA RLDPARIHYA QLCDVAGPRP DDMDEILRQA RNERRFPGDG DCDLPGLLRA LPANLPLSLE IPTRQLLERG VGALERARTA IDKARVLLAQ L
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