| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_30020 |
|---|
| Symbol | |
|---|
| ID | 7761903 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 3108502 |
|---|
| End bp | 3109587 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643805875 |
|---|
| Product | Glycosyl transferase, group 1 family protein |
|---|
| Protein accession | YP_002800143 |
|---|
| Protein GI | 226945070 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.349292 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCC TCCTGCTCAC CCGCTATCCG CGCACGGGCG CCAGCAGCCG GCTGCGCACC
CTGCAGTACC TGCCCCACCT GCGGGCCGCC GGCCACGAGG TCCGGGTGCA GAGCCTGTTC
GACGAAGCCT GGCTGGAAGG CCTCTACCGG CACGGCCGGC GCCCGCCGGG ACGGACCGCC
GCGCTCTATC TGAGCCGCCT GGCGGCGCTC GCCAGGGCCG CCGACCATGA CCTGCTGTGG
ATCGAGAAGG AACTCTTCCC CTACCTGCCC GCCTGGATCG AACGCCAGTT GGGCACGCCC
TGGATCGTCG ACTACGACGA TGCGGTGTTC CACAACTACG ACCTGGCGCG CAGCCCCCTG
GTGCGCCGGC TGCTGGGCGA CAAGATCGAC GCCGTCATGC GCGGCGCCAG CGGCGTGATC
GCCGGCAACC GCTATCTGGC CGAGCGCGCC CGTGCCGCCG GCGCGGCCCG GGTGACGCTC
ATTCCCACCG TGGTCGACCT CGGCCGCTAC CGGCCGCGCA TAACGGCGCC GGCCGCGCAC
CCGGTGATCG GCTGGATCGG CTCGCCCTCC ACCCAGAAGT ACCTGCTCGA CATCCGCGCG
CCCCTGCAGC AGGCCTGCCG CGGCCATGGC GCACGCCTGC TGCTGGTGGG CGCGACGCCG
GAAATCCGCG CCGGCCTGCC CGGCATCGAG GTACAGCTCG AACCCTGGAG CGAAGAGCGC
GAGGCGGCGC TGATCCGGCG CATGGACATC GGCATCATGC CGCTGCCCGA CGGCCCCTGG
GAACGCGGCA AGTGCGGCTA CAAGCTGATC CAGTACATGG CCTGCGGCGT GCCGCTGGTG
GCCTCGCCGA CCGGCGCCAA CCGGGAGATC GTGGAGCACG GCGGGGCGGG CCTGCTGGCC
GACTCCGCCG ACGCCTGGCA CGACGCCCTG TCCCGACTGC TCAGTTCGGC CTCCGAACGG
GAACGGCTGG GCCGGGCCGG GCGCCAGGCC GTGGAGAACC GCTACTCGCT GCAGCGCCAG
TTCCCGGTGC TGCTGGAAGC CCTGGGCGCG GCACTGCCGA GCGCCGGCAA GGCCCTGGTC
AATTGA
|
|---|
| Protein sequence | MKILLLTRYP RTGASSRLRT LQYLPHLRAA GHEVRVQSLF DEAWLEGLYR HGRRPPGRTA
ALYLSRLAAL ARAADHDLLW IEKELFPYLP AWIERQLGTP WIVDYDDAVF HNYDLARSPL
VRRLLGDKID AVMRGASGVI AGNRYLAERA RAAGAARVTL IPTVVDLGRY RPRITAPAAH
PVIGWIGSPS TQKYLLDIRA PLQQACRGHG ARLLLVGATP EIRAGLPGIE VQLEPWSEER
EAALIRRMDI GIMPLPDGPW ERGKCGYKLI QYMACGVPLV ASPTGANREI VEHGGAGLLA
DSADAWHDAL SRLLSSASER ERLGRAGRQA VENRYSLQRQ FPVLLEALGA ALPSAGKALV
N
|
|---|
| |