Gene Avin_29960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_29960 
Symbol 
ID7761897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3101659 
End bp3102981 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content65% 
IMG OID643805869 
ProductUDP-glucose/GDP-mannose dehydrogenase protein 
Protein accessionYP_002800137 
Protein GI226945064 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1004] Predicted UDP-glucose 6-dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTCA CCGTATTCGG AATAGGTTAC GTCGGACTGG TGCAAAGCGC CGTCCTGGCG 
GAAGTCGGCC ACGACGTACT GTGCGTCGAT ATCGACGAAG AGAAGATCGA ACGCCTGCGC
CAGGGCCATA TTCCCCTCTA CGAGCCGGGG CTGGAGACGC TGGTCAGGGA AAACCACGCC
GCCGGCCGCC TCAACTTCAC CAGCGACGCC GCCGAAGGCG TGAAGCGCGG CGAGGTGCAG
TTCATCGCCG TGGGTACGCC CGCCGACGAG GACGGCTCCG CCGACCTGCG CTACGTGCTG
GCCGTGGCGG AAACCATCGC CGAGCACATG GAACGCCACC AGGTCATCGT CGACAAGTCC
ACCGTCCCGG TGGGCACCGC CGAGCGGGTC GCCGCCCGCG TCGCCGAGAC CCTCGTCCGC
CGGGGACGCG ACGACCTGAC CTTCGAGGTG GTCTCCAACC CCGAATTCCT CAAGGAAGGT
TCGGCCGTCG CCGACTGCAT GCGCCCCGAC CGCATCGTCA TCGGCACCGG CAGCCGCGAT
GCCGAGGAAG TGATGCGCGA GCTGTACGCG CCCTTCAACC GCAACCACGA AAAGATCATT
GTCATGGACA CGCACAGCGC CGAGCTGACC AAGTACGCCG CCAACTGCAT GCTGGCGACC
AAGATCAGCT TCATGAACGA AATCGCCAGC CTGGCGGAAA TACTCGGTGC CGATATCGAG
ATGGTCCGCC GCGGCATCGG CTCCGACCCG CGCATCGGCT ACGACTTCAT CTACGCCGGC
GCCGGCTACG GCGGCTCCTG TTTCCCCAAG GACGTGCAGG CGCTGATCCG CACCGCCGAG
AACATCGACT TCGACGCCAA GCTGCTGAAA GCGGTGGCCC AGCGCAACAG GGAACAGAAG
ACCAGCCTGT ACAAGAAGAT CAGCCAGCAC TTCGAAGGCA CCCTGCAGAG CAAGACCTTC
GCGATCTGGG GGCTGAGCTT CAAGCCCAGG ACCGACGACA TGCGCGAAGC GCCCAGCCGC
ACCCTGATGG AGGCGCTGTG GAGAGCCGGG GCGCGGGTGC AGGCCTACGA CCCGGAAGCC
ATGGTGGAAG CCCAGCGCCT GTACGGCAAC CGCACCGACC TGACCCTCTG CGGCACCAAG
GAAGCGGCGC TGAAGGATGC CGACGCCCTG GTGATCGTCA CCGACTGGCA GGCCTTCAAG
GCCCCGGACT TCGAGTTCAT CAAGCAGCAG CTCCGCCAGC CGCTGATCTT CGACGGCCGC
AACCTGTTCG AGCCGACGCG CATGCAGCAA AAAGGCATCG TCTATCACTC GATCGGCCGC
TGA
 
Protein sequence
MKVTVFGIGY VGLVQSAVLA EVGHDVLCVD IDEEKIERLR QGHIPLYEPG LETLVRENHA 
AGRLNFTSDA AEGVKRGEVQ FIAVGTPADE DGSADLRYVL AVAETIAEHM ERHQVIVDKS
TVPVGTAERV AARVAETLVR RGRDDLTFEV VSNPEFLKEG SAVADCMRPD RIVIGTGSRD
AEEVMRELYA PFNRNHEKII VMDTHSAELT KYAANCMLAT KISFMNEIAS LAEILGADIE
MVRRGIGSDP RIGYDFIYAG AGYGGSCFPK DVQALIRTAE NIDFDAKLLK AVAQRNREQK
TSLYKKISQH FEGTLQSKTF AIWGLSFKPR TDDMREAPSR TLMEALWRAG ARVQAYDPEA
MVEAQRLYGN RTDLTLCGTK EAALKDADAL VIVTDWQAFK APDFEFIKQQ LRQPLIFDGR
NLFEPTRMQQ KGIVYHSIGR