| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_29790 |
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| Symbol | sdhA |
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| ID | 7761880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 3082055 |
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| End bp | 3083374 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643805852 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_002800120 |
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| Protein GI | 226945047 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGTACCAGG GTAACCTGAA GGCTGGTACC TCGTTCCTCA ACGAGTGGTA TGCCGTCGAT
CTGGTGAAGA ACCAGGACGG TGCTGTGGTT GGTGTCATCG CTCTCTGCAT CGAAACCGGC
GAAACCGTTT ACATCCGCTG CAAGGCTGTG GTCCTGGCCA CGGGTGGTGC CGGGCGTATC
TACGCTTCGA CCACCAACGC GCTGATCAAC ACCGGTGACG GCGTAGGCAT GGCTCTGCGT
GCCGGTGTTC CGGTTCAGGA CATCGAGATG TGGCAGTTCC ACCCGACCGG TATTGCTGGT
GCCGGTGTAC TGGTGACCGA AGGCTGCCGC GGCGAAGGCG GCTACCTGAT CAATGCCCAT
GGCGAGCGTT TCATGGAGCG TTATGCGCCG AACGCGAAGG ATCTCGCCGG TCGCGACGTG
GTGGCTCGTT CGATGGTCAA GGAAGTGATC GCCGGCAATG GCGTCGGTCC GAACAAGGAC
CACGTGCTGC TGAAGCTCGA CCACCTTGGC GAGGAAGTCC TGCACAGCCG CCTGCCCGGC
ATCTGCGAGC TGTCCAAGAC TTTTGCCCAT GTTGACCCTG TGGTTGCGCC GATCCCGGTC
ATCCCGACCT GCCACTACAT GATGGGTGGT GTGGCCACCA ACATCCATGG CCAGGCCATC
ACCCAGGATG CCAACGGCAA CGACAAGATC ATCGAAGGCC TGTTCGCCGT GGGCGAAGTG
GCCTGCGTAT CTGTCCATGG CGCCAACCGT CTGGGCGGCA ACTCGCTGCT TGACCTGGTG
GTGTTCGGTC GCGCTGCTGG CCTGCACCTG GAGAAAGCCC TCAAGGAAGG TATCGATACC
CGCGGAGCCA GCGAGTCCGA CATCGAGAGC TCCCTCAAGC GTCTGGCTGG CGTGAACGAA
CGTACCAGTG GCGAGGAAGT CGCTCCGCTC AAGCAGGAAC TGCAGCAGTG CATGCAGAAC
TACTTCGGCG TATTCCGCAC CGGCGAATAC ATGCAGAAGG GCATCGCCCA ACTGGCCGAG
CTGCGTGGTC GTATTGCCGA AGTCAAGATC AACGACAAGA GCCAGGCGTT CAACACCGCT
CGCGTCGAGG CTCTCGAACT GCAGAACCTG CTCGAAGTGG CCGAGGCCAC CGCGATCGCC
GCGGAAACCC GCAAGGAATC CCGTGGCGCC CACGCCCGCG AGGACTTCGA AGGCCGCGAC
GACGAGAACT GGCTGTGCCA CACCCTGTAC TTCCCGGGTG AGAAGCGCGT GGCTCAGCGT
GCCGTCAACT TCGCGCCGAA GACCGTTCCG GCGTTTGAAC CCAAAGTACG TACTTATTAA
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| Protein sequence | MYQGNLKAGT SFLNEWYAVD LVKNQDGAVV GVIALCIETG ETVYIRCKAV VLATGGAGRI
YASTTNALIN TGDGVGMALR AGVPVQDIEM WQFHPTGIAG AGVLVTEGCR GEGGYLINAH
GERFMERYAP NAKDLAGRDV VARSMVKEVI AGNGVGPNKD HVLLKLDHLG EEVLHSRLPG
ICELSKTFAH VDPVVAPIPV IPTCHYMMGG VATNIHGQAI TQDANGNDKI IEGLFAVGEV
ACVSVHGANR LGGNSLLDLV VFGRAAGLHL EKALKEGIDT RGASESDIES SLKRLAGVNE
RTSGEEVAPL KQELQQCMQN YFGVFRTGEY MQKGIAQLAE LRGRIAEVKI NDKSQAFNTA
RVEALELQNL LEVAEATAIA AETRKESRGA HAREDFEGRD DENWLCHTLY FPGEKRVAQR
AVNFAPKTVP AFEPKVRTY
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