Gene Avin_29550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_29550 
SymbolarsB 
ID7761856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3044882 
End bp3046102 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content64% 
IMG OID643805828 
ProductType III polyketide synthase 
Protein accessionYP_002800096 
Protein GI226945023 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3424] Predicted naringenin-chalcone synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.96869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGTC CCCACAACGC AGTTCTCACC GGCTTCACAC CCGTGCAACT GGCCAAACCC 
GTTCCCCAGG CGCTGACCCT GGAGCTGTCC GCCTATGCCT TCGCCCGCGC CTACTGCATC
AAGAACGGCG TCGGGACGGA CGACGAGGCG GGCTTCGCCA AGGTCTACCA GTCGGTCAAG
GAGAAGTTCG ACAAGTACGC CCTGTCGTCC GCGCAGATCA AGCGGCGTCA ACTGATCTTC
TTTCCGAAGG TCTCCGACAT CCATTTCGCC AACGGTCACG TCGATATCGC GGCGCCCGAG
CATGCCTACC TGAAGCTGTA CGACATGGCC ACCGACCCGC GCGGCTCCGA CCTCAAGGTC
CGCCACGAAA GCTACGCCAA GGTCGTCGAC CAGGGGCTGG AGCGGATGTT TCAGGACAGT
GCCGAAGCCC CCGACGATCT GATCCACGTG ACCTGCTCGG GCTACCTGTC GCCGAGTCCG
GTCGAGCGCA TGGCGGCCGA TCGCGGCTGG TTCGAGACCA CGGTGACCCA CAGCTATCAC
ATGGGCTGCT ACGGCGCCTT CCCGGCGATC AAGATGGCCC ACGGCATGCT TTCCTCGTCG
CGCTTCGGCG TCACCCCGGT CAAGCACCGG GTGGATATCG TGCATACCGA GCTGCTCTCG
GCGCACAACA ACATCGTCGA TGCGCGGGCG GAAAACATCA TCACCATGAC CCTGTTCGCC
GACGGCCTGA TCAAGTACTC GGTGCTCTCC GAGGAGGAAC TGCACCGCCA GGGCGGACAC
GGCCTCCGGG TCCTGGCGAT GAACGAGCAC CTGCTGCCCG ACTCGGCCGA CGAGATGACC
TGGGTGCCGG GCTCGCACCA GTTCCTGATG ACCCTCACGC CCATGGTGCC GGTGGTCATC
AAGCGCCATG TCCGCGACTT CGTGGTGAAG CTGCTCGAAC GCGCCGGCAT CGACTACGAG
CGGGAGAGGC TCGAACTGAC CTTCGCCATC CATCCCGGCG GACCGAAGAT CGTCGAGCAC
ATCCAGGAGG ATCTGGGGCT CAGCGACGAG CAGGTGGCGA TCAGCAAGAG CGTCTTCCTG
GAGAACGGCA ACATGTCCTC CGCCACGATT CCCCACATCC TCAAGCAGGT CCTCGAGGAG
GTGGACGTGG GCACGCGCGT CCTGTGCCTG GGGTTCGGTC CCGGACTGAC TGTCACCGGA
ATGGTGCTGG AGAAAATATG A
 
Protein sequence
MSSPHNAVLT GFTPVQLAKP VPQALTLELS AYAFARAYCI KNGVGTDDEA GFAKVYQSVK 
EKFDKYALSS AQIKRRQLIF FPKVSDIHFA NGHVDIAAPE HAYLKLYDMA TDPRGSDLKV
RHESYAKVVD QGLERMFQDS AEAPDDLIHV TCSGYLSPSP VERMAADRGW FETTVTHSYH
MGCYGAFPAI KMAHGMLSSS RFGVTPVKHR VDIVHTELLS AHNNIVDARA ENIITMTLFA
DGLIKYSVLS EEELHRQGGH GLRVLAMNEH LLPDSADEMT WVPGSHQFLM TLTPMVPVVI
KRHVRDFVVK LLERAGIDYE RERLELTFAI HPGGPKIVEH IQEDLGLSDE QVAISKSVFL
ENGNMSSATI PHILKQVLEE VDVGTRVLCL GFGPGLTVTG MVLEKI