Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_29280 |
Symbol | |
ID | 7761831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 3018633 |
End bp | 3019799 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643805804 |
Product | sugar ABC transport system, periplasmic substrate-binding protein |
Protein accession | YP_002800072 |
Protein GI | 226944999 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCACTGGT GGGTTTCCAG CGGCGAGCGG GCCAGCATCG AGGTGCTGCG CGAGCGAATC CGCGCCCAGG GCCTGGAGTG GCGCGAGCAG GCCGTCGCCG GCAGCGGCAC CGCCCGCTAT ATCAACGAGT TGCGCAAGCG CGTCGCCGGC GGCCGGCCGC CCAGTGCTTC GCAGATGATC GGCTTCGACA TCCAGGAATG GGCCAGGGCC GGCCACCTGG AGTCGCTCGA CGAAGCGGCG GCGCGCAACG AATGGGACGA GGTCGTGCCC TTCGGCATCC AGGCGCTCTC GAAATACCAG GGGCACTGGT ACGCCGCGCC GATCAACACG CACTCGACCA ACTGGCTGTG GATGAATCAG CGCCTGCTGG AGAAACTCGG CTCGCCGCCC GCCCCGGATA CCTGGGACGA CCTGGTCCTG CTGCTCGAAC GCGCCAGGAC CGCCGGCATG CTCCCGCTGG CGGTCGGGCG GGAAGCCTGG GAACACACCT TGCTGTTCGA ATCGGTCGCG GTGTCGACCG GCGGCGCCGA ATTCTATCGG CGCGCCTTCG TGGAACTCGA TGCCGAGGCG CTGCCCCTGC CGCTGGCGAT CCGCATCTTC GAGCGGATGC GGGTGCTGTC GCGCTTCGTC GATCCGGGTT TTCGCCGGCG CCGCTGGGAC CAGGCCACGG ACCTGGTGCG CAAGGGCGAG GCCCTGCTGC AGGTGCAGGG CACCTGGGTC GACGGGGAAT TCGCCCTGCA CGGCATGCAG CCGGGCAGGG ACTTCCAGTG TTTCCGGTTT CCCGACACCC AGGGCGTGGT GCTGTTCAAC AGCGATCAGT ACGTGCTGTT GAAGAACGGG CCGGGCAGCC AGGCGGCCCG GCGGATTCTG CTCGACACCC TGATGGACCC CGACTTCCAG GCCGCGGTCA ATCGCCGCTC CGGCGCCATC CCGGCACGCG TCGACGTGCC CAAGGACGGC TTCGACGCCT GCGGCCAGCG GGCCATCGAC GACATGCGCG GCGCCAACAT GAGACGCACC ATGATGGGTT CGATCGCCAT GGGCAACGCC AACCTGCCCG CCGTCAAGAC CGCCATCTAC AGCGTGGTGA GCCGCCATCT CGAAGGCGAA CTCGACGACG TCCGGGCGGC CGAAGCGCTG CTGCGGGCGC TTTCCGGAGA ACCCTGA
|
Protein sequence | MHWWVSSGER ASIEVLRERI RAQGLEWREQ AVAGSGTARY INELRKRVAG GRPPSASQMI GFDIQEWARA GHLESLDEAA ARNEWDEVVP FGIQALSKYQ GHWYAAPINT HSTNWLWMNQ RLLEKLGSPP APDTWDDLVL LLERARTAGM LPLAVGREAW EHTLLFESVA VSTGGAEFYR RAFVELDAEA LPLPLAIRIF ERMRVLSRFV DPGFRRRRWD QATDLVRKGE ALLQVQGTWV DGEFALHGMQ PGRDFQCFRF PDTQGVVLFN SDQYVLLKNG PGSQAARRIL LDTLMDPDFQ AAVNRRSGAI PARVDVPKDG FDACGQRAID DMRGANMRRT MMGSIAMGNA NLPAVKTAIY SVVSRHLEGE LDDVRAAEAL LRALSGEP
|
| |