Gene Avin_28880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_28880 
Symbolxth 
ID7761792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2982312 
End bp2983124 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content67% 
IMG OID643805766 
Productexonuclease III 
Protein accessionYP_002800034 
Protein GI226944961 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.734088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCG TCTCCTTCAA TATCAACGGC CTGCGCGCCC GTCCGCATCA GCTCTCGGCG 
CTCATCGACA AGCATCGGCC GGATGTGATC GGCCTGCAGG AGACCAAGGT CGCCGACGAG
CAATTCCCGC TCGAGCAGAT CGGGGAACTG GGCTACCACG TGCACTACCA CGGGCAGAAG
GGCCACTACG GGGTCGCCCT GCTCTCCCGG CAGCCGCCGC TGGAGGTGCA AAAGGGCTTT
CCCGACGACG GCGAGGACTC GCAGAAGCGC TTCATCTGGG GCGTCTACGC CGATGCCGCC
GGGCAGCCGG TCACCGTGAT GAACGGCTAT TTCCCGCAGG GCGAAAGCCG TGCCCATCCG
CTGAAGTTTC CCGCCAAGAC ACGCTTCTAT GCCGACCTGC AGGCCCTGCT GGAAAGCCGC
TTCGATCCAG GCCAGCCCCT GGCGCTGATG GGCGACTTCA ACATCGCCCC CGAGGACAGC
GACATCGGCA TCGGCGCGGA GAACGCCAGG CGCTGGCTGC GCACCGGCAA ATGCAGCTTC
CTGCCGGAAG AACGCGAATG GATGGCCCGG CTCAAGGACT GGGGCCTGCA GGACAGCTTC
CGCGAATTGC ACCCGCAGGC CTGCGACCGC TTCAGTTGGT TCGACTACCG CAGCCGCGGT
TTCGAGGACG ATCCCCGGCG CGGCCTGCGC ATCGACCTGA TCCTGACCTC CCGCGCCCTG
CGCCCGCGCC TGCGCGCGGC CGACGTGGAC TACGAACTGC GCGCCATGGA CAAGCCCTCC
GACCACGCGC CGGTCTGGCT GGAGCTCGAC TGA
 
Protein sequence
MKIVSFNING LRARPHQLSA LIDKHRPDVI GLQETKVADE QFPLEQIGEL GYHVHYHGQK 
GHYGVALLSR QPPLEVQKGF PDDGEDSQKR FIWGVYADAA GQPVTVMNGY FPQGESRAHP
LKFPAKTRFY ADLQALLESR FDPGQPLALM GDFNIAPEDS DIGIGAENAR RWLRTGKCSF
LPEEREWMAR LKDWGLQDSF RELHPQACDR FSWFDYRSRG FEDDPRRGLR IDLILTSRAL
RPRLRAADVD YELRAMDKPS DHAPVWLELD