Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_28880 |
Symbol | xth |
ID | 7761792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 2982312 |
End bp | 2983124 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643805766 |
Product | exonuclease III |
Protein accession | YP_002800034 |
Protein GI | 226944961 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.734088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATCG TCTCCTTCAA TATCAACGGC CTGCGCGCCC GTCCGCATCA GCTCTCGGCG CTCATCGACA AGCATCGGCC GGATGTGATC GGCCTGCAGG AGACCAAGGT CGCCGACGAG CAATTCCCGC TCGAGCAGAT CGGGGAACTG GGCTACCACG TGCACTACCA CGGGCAGAAG GGCCACTACG GGGTCGCCCT GCTCTCCCGG CAGCCGCCGC TGGAGGTGCA AAAGGGCTTT CCCGACGACG GCGAGGACTC GCAGAAGCGC TTCATCTGGG GCGTCTACGC CGATGCCGCC GGGCAGCCGG TCACCGTGAT GAACGGCTAT TTCCCGCAGG GCGAAAGCCG TGCCCATCCG CTGAAGTTTC CCGCCAAGAC ACGCTTCTAT GCCGACCTGC AGGCCCTGCT GGAAAGCCGC TTCGATCCAG GCCAGCCCCT GGCGCTGATG GGCGACTTCA ACATCGCCCC CGAGGACAGC GACATCGGCA TCGGCGCGGA GAACGCCAGG CGCTGGCTGC GCACCGGCAA ATGCAGCTTC CTGCCGGAAG AACGCGAATG GATGGCCCGG CTCAAGGACT GGGGCCTGCA GGACAGCTTC CGCGAATTGC ACCCGCAGGC CTGCGACCGC TTCAGTTGGT TCGACTACCG CAGCCGCGGT TTCGAGGACG ATCCCCGGCG CGGCCTGCGC ATCGACCTGA TCCTGACCTC CCGCGCCCTG CGCCCGCGCC TGCGCGCGGC CGACGTGGAC TACGAACTGC GCGCCATGGA CAAGCCCTCC GACCACGCGC CGGTCTGGCT GGAGCTCGAC TGA
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Protein sequence | MKIVSFNING LRARPHQLSA LIDKHRPDVI GLQETKVADE QFPLEQIGEL GYHVHYHGQK GHYGVALLSR QPPLEVQKGF PDDGEDSQKR FIWGVYADAA GQPVTVMNGY FPQGESRAHP LKFPAKTRFY ADLQALLESR FDPGQPLALM GDFNIAPEDS DIGIGAENAR RWLRTGKCSF LPEEREWMAR LKDWGLQDSF RELHPQACDR FSWFDYRSRG FEDDPRRGLR IDLILTSRAL RPRLRAADVD YELRAMDKPS DHAPVWLELD
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