Gene Avin_28840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_28840 
Symbol 
ID7761788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2974526 
End bp2975869 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content69% 
IMG OID643805762 
ProductSodium:alanine symporter 
Protein accessionYP_002800030 
Protein GI226944957 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1115] Na+/alanine symporter 
TIGRFAM ID[TIGR00835] amino acid carrier protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTCCA TCCACACGCT GGTCGACGCA CTCAACGGCA TCGTCTGGGG GCCGCCGATG 
CTGGTGCTGA TCCTCGGCAC CGGTCTGTTC CTGCTGCTGA GGCTCGGTTT CATGCCCTGG
CGGCGGCTGG CGACCGGCTT CGCCCTGCTC TGGCAGGGGC GGGTCGCGGG AGCGGGCGCC
ACCGGCGAGA TCAGCCCGTT CCAGGCACTG ATGACCTGTC TGGCGGCCAC CGTCGGCACC
GGTAACATCG CCGGGGTGGC CACCGCGATC TTCCTCGGCG GCCCCGGTGC GCTGTTCTGG
ATGTGGTGCA CCGCGCTGGT CGGCATGGCC ACCAAGTACT GCGAGGTGGT GTTGGCCGTG
CACTACCGCG AGCGCGACGA GCGTGGCGAG CACGTCGGCG GTCCGATGTT CGCCATCAGG
AACGGCCTGG GGCCGAAGTG GGCCTGGCTG GGCGGCGCCT TCGCCCTGTT CGGCGGGCTG
GCCGGCTTCG GCATCGGCAA CATGGTGCAG GTCAACAGCA TGGCCCACGC CCTGGAGGAC
AGCTTCGGCG TGCCGATGTG GAGCACCGGC CTGGCGACCA TGCTGGTCAC CGCGCTGGTG
ATCCTCGGCG GCATCAGGCG CATCGGCAAG GTGGCCGAGG CCCTGGTGCC CTTCATGTGC
CTGGCCTACG TGATCGCCGC CCTGGTGGTG CTGGTGGCGA ACGCCGAGGC GATTCCGGCC
ACCTTCGCTT TGATCTTCGG GCATGCCTTC AGCCCGGCGG CGGCCAGCGG CGGCTTCGCC
GGCGCGGCGG TGATGGCGGC GATCCGCTAC GGCGTGGCTC GCGGCATCTT CTCCAACGAG
GCCGGGCTGG GTACCGCCGG CATCGCCCAG GCCGCCGGCA CCACCACCAG TTCGGTGCGC
TCGGGGCTGA TCGGCATGCT CGGCACCTTC ATCGATACCA TCGTGGTCTG CAGCATGACC
GGCCTGGCGA TCCTCAGCTC CGGTGTCTGG ACCGGCGGCA AGAGCGGTGC GGCGCTCTCC
GCGGCGGCCT TCGAGTCGGC GATGCCGGGC TTCGGTGCGG CGCTGCTCAG TCTGGCCCTG
GTGGTTTTCG CCTACACTAC GGTGCTCGGC TGGAGTTTCT ACGGCGAGAA ATGCTGGGAG
TTCCTCTGCG GCACCCGGGC GATCCTGCCG TTCCGGGTGG TCTGGGTCGC GGCGATTCCC
TTCGGCGCCA TCGCCCAACT GGATTTCGCC TGGCTGGTGG CCGACACCCT CAACGGCCTG
ATGGCGATCC CCAACCTGAT CGCGTTGCTG CTGTTGAGTC CGGTAGTGCT CGGACTGACC
CGGGAATACT TCGCCGGGCG ATGA
 
Protein sequence
MESIHTLVDA LNGIVWGPPM LVLILGTGLF LLLRLGFMPW RRLATGFALL WQGRVAGAGA 
TGEISPFQAL MTCLAATVGT GNIAGVATAI FLGGPGALFW MWCTALVGMA TKYCEVVLAV
HYRERDERGE HVGGPMFAIR NGLGPKWAWL GGAFALFGGL AGFGIGNMVQ VNSMAHALED
SFGVPMWSTG LATMLVTALV ILGGIRRIGK VAEALVPFMC LAYVIAALVV LVANAEAIPA
TFALIFGHAF SPAAASGGFA GAAVMAAIRY GVARGIFSNE AGLGTAGIAQ AAGTTTSSVR
SGLIGMLGTF IDTIVVCSMT GLAILSSGVW TGGKSGAALS AAAFESAMPG FGAALLSLAL
VVFAYTTVLG WSFYGEKCWE FLCGTRAILP FRVVWVAAIP FGAIAQLDFA WLVADTLNGL
MAIPNLIALL LLSPVVLGLT REYFAGR