| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_28780 |
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| Symbol | |
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| ID | 7761782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 2964188 |
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| End bp | 2965726 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643805756 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002800024 |
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| Protein GI | 226944951 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.506262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCAT CCGTTTTATC TTTCCGTCCC AACCGACTGG CCTGGTCGAT GACGCTTGCC
CTGGGCCTGG CCCTCGGTGG CTGCACCCTC GGGCCGGACT ACCAGCGACC GCAATTGTCC
GCCCCGGACA GCTTCAGGGA GGGCGAGGGC TGGAAGCTGG CCACGCCGGC CGACGAGGCC
GAACGCGGTC CCTGGTGGGA AATGTACGGC GATCCCATCC TCGACGATCT GATGCGCCGG
CTGGATGAGT CCAACCAGAC CGTCGCCCAG TCGATCGCCC AGTACCTGCA GGCGAAGGCG
ACGGTACGCA CGGCGAAGGC GGACTTCTTC CCGACCGGGC GGGTCACCGT CGACGAAACC
CGCTCGGCGA CGGCCAGCGG CAGCGGCGGT ACCTCGCGCC TGCCCGACGG CTCGACGGTG
AGCTCCGGCG GCGGTGGCGG GACCATTTCC AACAGCTACA ACGCGGTCAG CAACATCAGT
TGGGAACTGG ACTTCTGGGG CAAGATGCGC CGCCAGTTGG AGTCGGATCG CGCCGGCCTG
CAGGCCAGCG CCGCCGATCT CGCCGCGGTG CGCCTCAGCC AGCAGTCGAC CCTGGCCCAG
AGCTACCTGC AACTGCGCGT GCTGGATGGC CAGCGGCGCC TGCTCAAGGC CACGGTGGAG
GCCTACGCAC GCACCTTGCG GCTGACCGAG AACCAGTATC GCGCCGGCAT GGTCACCAAG
GCCGATGTGA CCCAGGCGCA GACCCAACTG AAGAGCACCG AGGCCCAGGC CATCGACCTC
GATTACCAGC GCGCGCAACT GGAGCATGCC ATCGCCGTGC TGATCGGCGT GCCGCCGTCC
GAGCTCGAGC TGGCCGAGCT GGACAGCCTG CCGGACCTGC CGGAAATCCC CACGCTGCTG
CCGTCGCAAC TGATCGAGCG CCGCCCCGAC GTGGCCGCGG CCGAGCGCGA GGTGATGTCC
GCCAACGCGC TGATCGGCGT GGCCAAGGCG GCGCGTTTCC CGACCTTCAG CCTGAGCGCG
GCGGGCGGTT ATCGTGCCAC CCATACAGAC TACTGGTTCG AGAAGGACAA CCGCTTCTGG
AACATCAGCC CGGAAATGGC CCTGACCCTG TTCGACGGCG GCCTGCTGCG TGCCCAGGTG
GACCAGGCGC GGGCCACCCA CCAGCAGGCG GTGGCGACCT ACCGGCAGAC GGTGCTGGAC
AGCTTCCGCG AGGTGGAGGA CTACCTGGTG CAACTGAGCG TGCTGGAGCG CGAGACCCGG
GCCCAGCAGG AGGCGGTGGA GGCGGCCCAG GAGTCCCGCC GGCTGATGGA GAACCAGTAC
AAGGCCGGTA CCGTCGACTA CTCCAGCGTG GTCGATGTGC AGACCGCGGC CTTGTCCAAC
GAGCGCACCG TCCTGACCCT CCTGAGCAAC CGGCTGACCG CCAGCGTGCA ACTGATCGCC
GCTCTCGGCG GTGGCTGGGA CAGCGCCGAG CTGGACAATC TCGAGAAGCT GGACGAGCGG
CTGGAACAGG CGCGGCTGGA AGATCCGCAA GAGGATTGA
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| Protein sequence | MTASVLSFRP NRLAWSMTLA LGLALGGCTL GPDYQRPQLS APDSFREGEG WKLATPADEA
ERGPWWEMYG DPILDDLMRR LDESNQTVAQ SIAQYLQAKA TVRTAKADFF PTGRVTVDET
RSATASGSGG TSRLPDGSTV SSGGGGGTIS NSYNAVSNIS WELDFWGKMR RQLESDRAGL
QASAADLAAV RLSQQSTLAQ SYLQLRVLDG QRRLLKATVE AYARTLRLTE NQYRAGMVTK
ADVTQAQTQL KSTEAQAIDL DYQRAQLEHA IAVLIGVPPS ELELAELDSL PDLPEIPTLL
PSQLIERRPD VAAAEREVMS ANALIGVAKA ARFPTFSLSA AGGYRATHTD YWFEKDNRFW
NISPEMALTL FDGGLLRAQV DQARATHQQA VATYRQTVLD SFREVEDYLV QLSVLERETR
AQQEAVEAAQ ESRRLMENQY KAGTVDYSSV VDVQTAALSN ERTVLTLLSN RLTASVQLIA
ALGGGWDSAE LDNLEKLDER LEQARLEDPQ ED
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