| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_28640 |
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| Symbol | |
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| ID | 7761769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 2951210 |
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| End bp | 2953714 |
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| Gene Length | 2505 bp |
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| Protein Length | 834 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643805743 |
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| Product | cyclic di-GMP signal transduction protein |
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| Protein accession | YP_002800011 |
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| Protein GI | 226944938 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGAAAA ACAAGAAAAA CAACGCTTTG GGCAAGCGCT GGTCGGGAAT GTCGCTGCTG
CTGGCTGTCT GGGGTCTGAT TTGTCTATTC GGCGGTTCGC TGCCGCCGGT AAAGTATTTT
CTGACGCTGC ACCAGATGGT GGAAACCGCT TCCATCGTGG TGAGCGTGCT GATCTTCGCC
GTTGGCTGGC ACACTTTCAG GATGCATGGG AACCGCGTCA TCCTGATGGT CTCCTGCACC
TTTCTGGGTG TGGCGATTTC CGACTTTTCG CACATGTTGT CCTACTCGGG GATGCCCGAT
TTTCTCGGTC CGAACTCCCC GGAGAAGGCG ATCGGTTTCT GGCTGCTGGC ACGTTGTCTG
ACGGCGCTGG GCGTCCTGAT CATCGCCTGC CTGCCCTGGC GGCTGGAGGT TTCCGGCCGC
TCCGCCGCGA TCGACCCGGA CAGATGGAGA GTCCTTCTTG TCACCCTGTG CGCCATGGTA
TCGATCCATC TGGTCCTGCT TCTGTTTCCG GAGATACTTC CGAGGACTTA TCAGGAGGGC
GTCGGCCTGA CGGAGTTCAA GCGGGGAGTC GAGTTCTCCA TCATCGCCAT CCATGCCGCC
AGCATAGTCT TGCTGTCGGT ACGAAGACGC AGGGATATGG GGCTCGAGAA AGGCCTGCTG
ATCTGCTCCC TGCTGGTCAT GATGATGGGG GAGTTCTTTT TCACGATATA TAGCGATGTC
ACGGATGCCT ATAACATCTT CGGCCATATC TACAAGATAA TTGCCTACTT GGTCTTGTAC
AGGGCTATCT TTGTCGAATC CATTCTCGCC CCTTACAAGT TTCTTGAGGA TTCGAGGCAG
CATGTCGAAG TTCTCATGGG GGCGTTGCCG GATATCATTC TCGAGGCTCG CCTCGATGGC
CTGCTCCTCA GTGCCCACGT TCCGACGGAT GGAAAGCTGT TCGGAGAGAA GAAGCCGAAG
GCCGGGGATT ATCTTCAGGA TCGGCTCCCC TCCCAGGCCA TGGACTGTCT GACCGGGGCG
ATGCGGGCGG CGGAGAGCGG GGGACAGGGC ACGGGGCTGC GGTTCCGGAC CGGCAAGGGG
GCGGAGGAGC TGGTTTTCGA TGTTTCGGCT TCGTTGCTCG CGCAGAGGTC CGATAGGAGC
AGTCATTTCG TCATCCTGAT CCGGGACGTG ACGGAACAGG CCAGGAATCA GTCCAAGATC
GAGCAGATGG CGCACTTCGA TGCGCTCACC GGGCTTCCGA ACCGAACGCT GTTCAATACC
TGCTTCGATG TCGAGGCCAC GCGCTGCGAG AAGCAACGGC AGCCTCTGGC GTTGATCTTC
ATGGACCTCG ACAACTTCAA GAACGTCAAC GATTCGCTGG GTCATAAGGT CGGCGATGCC
CTGCTGGTCG AACTCGCCGC CCGCCTGGAA AAGGTCCTGC GCCCGAGGGA CATGGTGTCC
CGCCAGGGAG GCGACGAGTT CATGTTCCTG CTTCCCGAGG CGGACGTGCG CACGGCCGAA
CAAATGACCG AGTGCATCAA GAGGTCCGTC GAAGTGCCCA TTCAAGTGGG GCAATATACG
CTGCACGTTT CCGCGTCGAT GGGCATCTGC ATGTTTCCCC AGGATGGGCG GGATCTCGAA
ACCCTGTCCA GCCATGCCGA CATCGCCATG TATCGGGCCA AGCAGGAGCG CCGCAGCCAC
TATGCGTTCT TCTCGGAGGA AATGCAGGCG TGCGCGGCCA GATCCCTGCT GCTGGAGGGA
GCGCTGCGCG AAGCGGTCCA ATGGGGGCAA CTGGATGTCT ATTACCAGCC GCAGTTCGAC
ATAACGGGAA GAAAGCTGGA AGGCGCCGAG GCTCTGGTGA GGTGGCGCCA TCCCGAACTG
GGGTTCATCA GTCCCGCCGA GTTCATCCCC ATCGCCGAGA TCACCGGTCA GATCATCAAG
ATAGGCGATC TGGTCCTGCG CAGGGCCACG CAGCAGATGA GGCATTGGCT GGATGCGGGT
TTGCCCGGGG ACATGAGCAT CGCGGTCAAC ATCTCCATGG CGCAGTTCCG CGATACGGCC
CTGCTGGAAA AGATCGACAC GGCGCTCGCC GAAAGCCAGT TGCCGCCATG GGCGCTCGAA
CTGGAGCTGA CCGAAAGCGT GGCGATGGAC GATCCCGAGC AGGTCGTCGA CATCGTGCGC
AGCCTGCGCT CCCGGGGCGT GAAGCTTTCC ATCGACGACT TCGGCACCGG CTATTCGTCG
CTCAGCTATC TGAAGAAGCT GCGGGTACAC AAGCTGAAAA TCGACCGTTC CTTCATCCAG
GCCATTTCGT CCGCTGGTAG CGACCGGAGC ATCGTCCAGG CCATCATCGG CCTGGCCAAG
GATCTGGACA TGCAGACCAT CGCCGAGGGC ATCGAGACCG AAGAACAGCG CCAGTTGCTG
GAAGCGCTGG GCTGCGATTC GGGGCAGGGC TACCTGTTCT GCAAGCCGTT GCCGGCCTCG
GAGTTCCTGC CTGCGCTGCT CGAGTTCTCC ACAAGCCCCT GGTGA
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| Protein sequence | MRKNKKNNAL GKRWSGMSLL LAVWGLICLF GGSLPPVKYF LTLHQMVETA SIVVSVLIFA
VGWHTFRMHG NRVILMVSCT FLGVAISDFS HMLSYSGMPD FLGPNSPEKA IGFWLLARCL
TALGVLIIAC LPWRLEVSGR SAAIDPDRWR VLLVTLCAMV SIHLVLLLFP EILPRTYQEG
VGLTEFKRGV EFSIIAIHAA SIVLLSVRRR RDMGLEKGLL ICSLLVMMMG EFFFTIYSDV
TDAYNIFGHI YKIIAYLVLY RAIFVESILA PYKFLEDSRQ HVEVLMGALP DIILEARLDG
LLLSAHVPTD GKLFGEKKPK AGDYLQDRLP SQAMDCLTGA MRAAESGGQG TGLRFRTGKG
AEELVFDVSA SLLAQRSDRS SHFVILIRDV TEQARNQSKI EQMAHFDALT GLPNRTLFNT
CFDVEATRCE KQRQPLALIF MDLDNFKNVN DSLGHKVGDA LLVELAARLE KVLRPRDMVS
RQGGDEFMFL LPEADVRTAE QMTECIKRSV EVPIQVGQYT LHVSASMGIC MFPQDGRDLE
TLSSHADIAM YRAKQERRSH YAFFSEEMQA CAARSLLLEG ALREAVQWGQ LDVYYQPQFD
ITGRKLEGAE ALVRWRHPEL GFISPAEFIP IAEITGQIIK IGDLVLRRAT QQMRHWLDAG
LPGDMSIAVN ISMAQFRDTA LLEKIDTALA ESQLPPWALE LELTESVAMD DPEQVVDIVR
SLRSRGVKLS IDDFGTGYSS LSYLKKLRVH KLKIDRSFIQ AISSAGSDRS IVQAIIGLAK
DLDMQTIAEG IETEEQRQLL EALGCDSGQG YLFCKPLPAS EFLPALLEFS TSPW
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