Gene Avin_27920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_27920 
SymbolflhB 
ID7761697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2873040 
End bp2874248 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content69% 
IMG OID643805671 
Productflagellar biosynthetic protein 
Protein accessionYP_002799939 
Protein GI226944866 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1377] Flagellar biosynthesis pathway, component FlhB 
TIGRFAM ID[TIGR00328] flagellar biosynthetic protein FlhB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0219879 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGCCG TTCATCTGCA CGAGTCGCCG GCGGCGCACT GGTGGGTCAT GGCTGACGAG 
AGCAGCGATC AGGAAAAGAC CGAAGCGGCG AGTCCGCGAC GCCTGGAGAA GGCCCGGGAA
GAGGGGCAGG TCGCCCGTTC GCGCGAGTTG ACCACCTTCC TGCTGCTGCT GGCCGGCATC
GCCGCCCTGT GGAGCATGGG CGGGCTGCTC CACGAGCGGC TGGCCGAGGT CATGGAGCAG
GCCCTGCTGT TCGAGCGGGC CCAGGCCTTC GATAGCGCCC GCATGCTGGC GCGTTTCTGG
GAGCTGGGCG AGGGCACGCT GTTCACGTTG CTGCCGCTGT TTCTGCTGAT GGCGGTGGTG
GCTCTGGTCG CGCCGTCGCT GCTCGGCGGT CTGCTGGTTT CGGCCAAGGC GCTGCAGCCG
CAACTGGCCC GGCTCAACCC GCTCAAGGGC CTCAAGCGGG TCTTCTCGAC CCAGGCGCTG
GCCGAACTCG GCAAGGCCGT CGCCAAGAGC ATCCTGGTCG GCTGGATCGC GGTGTTTTTC
CTGCGCAAAT ACATCGACGA ACTGATGGCG CTGTCCGGCA TGCCGATCCG CGAGGCCCTG
GCCGATGCCA TGCGGCTGAT GGCCCTGGCC AGCGCGATGA TCGTGCTGGG GCTGATCCTG
GTGGTGGCCC TGGACGTGCC CTACCAGTTG TGGAGCCACG CCAGGAAATT GCGCATGAGC
AAGGAGGAAC TGCGCCAGGA GCACAAGGAG TCGGAGGGCG ATCCCCACGT CAAGGGACGC
ATCCGTTCGC AGCAGCAGGC CATGGCGCGC TCGCGGATGA TGAGCAAGGT GCCGACGGCC
GACGTGATCG TCACCAACCC TACCCACTAC GCCGTCGCGC TCAGCTACCG GGACGGGCAG
ATGGGCGCGC CGCGGGTGGT CGCCAAGGGC GCCGATGCGC TGGCCGCGCG CATCCGCGAG
CTGGGTGGCG AGCATGCCGT GCCGTTGCTG GAGGCCGCGC CCCTGGCGCG GGCGCTCTAT
TACCACGTCG ATCTCGACCG GGAAATCCCG GTGGAGTTGT ATACCGCCGT GGCCGAGGTG
CTGGCCTGGG CCTACCGCCT GCGGCAGGTG CGCGAGGAGG GCGGCGAGAT GCCGGAAACC
CCGCGCGACC TGCCGGTGCC GGAGGGCATG GACGAGCGCG GCCAATCCGA GGAATCGCAG
ACCCGATGA
 
Protein sequence
MAAVHLHESP AAHWWVMADE SSDQEKTEAA SPRRLEKARE EGQVARSREL TTFLLLLAGI 
AALWSMGGLL HERLAEVMEQ ALLFERAQAF DSARMLARFW ELGEGTLFTL LPLFLLMAVV
ALVAPSLLGG LLVSAKALQP QLARLNPLKG LKRVFSTQAL AELGKAVAKS ILVGWIAVFF
LRKYIDELMA LSGMPIREAL ADAMRLMALA SAMIVLGLIL VVALDVPYQL WSHARKLRMS
KEELRQEHKE SEGDPHVKGR IRSQQQAMAR SRMMSKVPTA DVIVTNPTHY AVALSYRDGQ
MGAPRVVAKG ADALAARIRE LGGEHAVPLL EAAPLARALY YHVDLDREIP VELYTAVAEV
LAWAYRLRQV REEGGEMPET PRDLPVPEGM DERGQSEESQ TR