| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_27770 |
|---|
| Symbol | rfbG |
|---|
| ID | 7761682 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 2858762 |
|---|
| End bp | 2859838 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643805656 |
|---|
| Product | CDP-glucose 4,6-dehydratase |
|---|
| Protein accession | YP_002799924 |
|---|
| Protein GI | 226944851 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | [TIGR02622] CDP-glucose 4,6-dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGACAT CCGTGCGCCA TGCCGCCAGT GTCAACTTTT GGCAAGGGAA GCGGGTTCTG
CTGACCGGCC ACACCGGCTT TAAGGGCGGT TGGCTGGCAT TGTGGCTGCA GAGGCTGGGA
GCGGTGGTAA CGGGAATCGC TTTGCCCCCC CAGACTAGGC CAAACCTGTT CGAGTTGGCC
CGAGTTGCCG ATGGTATGCA CAGTCATTTC GCCGATATTC GCGATGCAGC AAAACTTATG
GAAATAGTGC AAGCCGCGCA GCCAGAAGTG GTGTTCCATC TAGCGGCCCA ACCGCTGGTA
CGTGCAAGCT ACCGCGAGCC GGTAGCCACC TTTGCCTCTA ATGTGATGGG CACGGTACAT
GTGCTGGATT CCATGCGTGG CTTGGATAGC GTGCGTGTGG CGGTGATGGT GACCACCGAC
AAGGTGTACC GCAATCTGGA ACATCCCTAT CCCTATCGTG AAGACGATGT CTTGGGTGGC
CACGATCCCT ACAGTGCCAG CAAGGCGGCG AGTGAAATCG TCATTGCCAG TTACCGCGAT
GCCTTTTTGG CGCAGCAGGG GGTGGCGATT GCCTCTGCCC GGGCGGGAAA TGTAATTGGT
GGCGGCGACT GGTCGGAAGA CCGCTTGATT CCCGATGCGC TGCGAGCCTG GCAGTCCGGT
CAGTTGCTGG AGGTCCGCCG GCCCGAGGCC ATCCGTCCCT GGCAGCATGT GCTGGAGCCG
CTCAGTGGTT ATCTAGTACT GGCAGAAATG CTCTGGCATG AACCTGCGCG GGCTGGCGCT
TACAATTTCG GCCCGTTCAC CCATGAGGCG GCCACCGTGC GGAAGGTCAT TGAGATGGCC
CGCGAGGCTT ACGGCCAGGG TGATGTGCGT TACGGCTATG GAGCCGGATG TCCGCATGAA
GCGGGTTGGC TGGCGCTGGA GACCAGTAAG ACGCGAGTGG CATTAGGCGT GGTGCCATGC
TGGTCACTGG CCGAAAGTGT GAGTCGCACC ATTGCTTGGC ATCGAGCACA GCACGGAGGG
GCCGATGCGC GGGGCTTGTG CGAAGCCGAA ATAAAGGCAC ATGAGACGCG AGTATGA
|
|---|
| Protein sequence | MVTSVRHAAS VNFWQGKRVL LTGHTGFKGG WLALWLQRLG AVVTGIALPP QTRPNLFELA
RVADGMHSHF ADIRDAAKLM EIVQAAQPEV VFHLAAQPLV RASYREPVAT FASNVMGTVH
VLDSMRGLDS VRVAVMVTTD KVYRNLEHPY PYREDDVLGG HDPYSASKAA SEIVIASYRD
AFLAQQGVAI ASARAGNVIG GGDWSEDRLI PDALRAWQSG QLLEVRRPEA IRPWQHVLEP
LSGYLVLAEM LWHEPARAGA YNFGPFTHEA ATVRKVIEMA REAYGQGDVR YGYGAGCPHE
AGWLALETSK TRVALGVVPC WSLAESVSRT IAWHRAQHGG ADARGLCEAE IKAHETRV
|
|---|
| |