Gene Avin_27550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_27550 
Symbol 
ID7761662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2832233 
End bp2833261 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content59% 
IMG OID643805631 
Productputative periplasmic protease 
Protein accessionYP_002799904 
Protein GI226944831 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0616] Periplasmic serine proteases (ClpP class) 
TIGRFAM ID[TIGR00706] signal peptide peptidase SppA, 36K type 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTGG AGTTTTTTCT CGATTATGCC GGTTTTCTGG CCCAGACCGT GACAGTGGTG 
GTGGCCGTTC TGGTGATATT GGTCGCCATC GCGGTCTTGC GCAGCAGAAG CCGTCATCGG
GGCGAAGGGC ATCTCGAGGT GCACAGGCTC AATGATTTCT ATAAGTCCCT GCGGGAAAGT
CTAGAGCAGA TAGTGCTGGA CAAGGACCGC CTCAAGACCC GGCGCAAGGC GGAGGCCAAG
GCCGAGAAAC GGGAGCGGAA GGAGGGCAAG ACGAAGCCCA GGCTTTTCGT GTTGGACTTC
GATGGCGACA TCCGGGCTTC CGCTACCGAC AAGCTGCGTC ATGAAGTGAC GGCCGTGCTG
AGCATGGCCA AGCCCGAAGA CGAAGTCGTG TTGCGCCTGG AGAGCGGGGG CGGGTTGGTG
CACAGCTATG GCCTGGCCGC TTCGCAATTG GTCCGTATCC GCCAGGCTGG TGTACCCCTG
ACCGTATGCG TCGACAAGGT GGCCGCCAGC GGCGGTTACA TGATGGCTTG CATCGGTGAT
CGGATTCTTT CCGCGCCTTT CGCCATCCTC GGCTCCATCG GTGTGGTGGC GCAGTTGCCC
AATGTGCATC GGTTGCTGAA AAGGCATGAC ATCGACTTCG AAGTGCTCAC CGCCGGCGAG
TACAAGCGCA CTTTGACGGT ATTTGGTGAG AACACCGAGA AAGGCCGGGA AAAGTTCCAG
GAGGACCTGG AAACCACCCA TGAGCTGTTC AAGAACTTCG TTGCCCGCTA CCGGCCGCAA
TTGACCATCG ATGAGATCGC CACCGGCGAG ATCTGGCTCG GGCAGAGTGC GCTGGAGAAG
CAACTGGTCG ATGAGTTGAT GACCAGCGAC GAATACCTGG CGGCGAAGGC CGGCAGTGCG
GAGCTGTTCC AACTGCATTA CGCCGAAAGA AAGAGTCTGC AGGAGCGTTT CGGCTTGGGG
GCTGCCCTGG CCGTGGACCG TGTGCTTCTG AACTGGTGGG AGCGCTTGAG TCGAAGTCGC
TATCAGTGA
 
Protein sequence
MAVEFFLDYA GFLAQTVTVV VAVLVILVAI AVLRSRSRHR GEGHLEVHRL NDFYKSLRES 
LEQIVLDKDR LKTRRKAEAK AEKRERKEGK TKPRLFVLDF DGDIRASATD KLRHEVTAVL
SMAKPEDEVV LRLESGGGLV HSYGLAASQL VRIRQAGVPL TVCVDKVAAS GGYMMACIGD
RILSAPFAIL GSIGVVAQLP NVHRLLKRHD IDFEVLTAGE YKRTLTVFGE NTEKGREKFQ
EDLETTHELF KNFVARYRPQ LTIDEIATGE IWLGQSALEK QLVDELMTSD EYLAAKAGSA
ELFQLHYAER KSLQERFGLG AALAVDRVLL NWWERLSRSR YQ