Gene Avin_26980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_26980 
Symbol 
ID7761605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2767609 
End bp2770074 
Gene Length2466 bp 
Protein Length821 aa 
Translation table11 
GC content66% 
IMG OID643805575 
Productglucan 1,4-alpha-glucosidase 
Protein accessionYP_002799848 
Protein GI226944775 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3387] Glucoamylase and related glycosyl hydrolases 
TIGRFAM ID[TIGR01535] glucan 1,4-alpha-glucosidase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACAAC CAGCTAGATT CCGCAAAACA CTGCTGAGCG TCCTGATCGG CGCACTGGGA 
ATCGCCCAGG CCGCCGGGGC GGCCAACATG GCCCCCGGCG CGCCGGGCGC GGCGCCGTTC
TGGTCCTATT CGGGCAAGAC CGGCATCGGT ACTTCCTACG AGCAGTACGA GGACGGCCAG
TACTCGCCGC AAGCGGCCAC CGGCGAAGTC TCGAAGGTCT GGTTCTCCCT GGCCCGGGGG
GTCGTCACCG AAACCATGTT CGGGCTGATC CACGAAGCCC AGCTCCGCGA AATGCAACTG
GTGATCCAGG GCCCCGACTT CCTGGACCTG GAAGCGCAGG ACACCGACAG CGAGATCCAC
TATCTGTCGG TCGACGATCA GGGCCGCCCC ACCTCACTGG CCTACAAGAT CGTCAACCGC
GACAGGCAGG GCCGCTACGA GATCGAGAAG CACATCTTCA CCGACCCGGA CGCCGATTCG
CTGGTGATAC GGGTCATCTT CCGCAGCCAG GAGCCGGGCA TCCAGGCCTA TGTGCACATC
GATCCGGCCA TCGGCAACGA CGGCAGTGGC GACAGCGCCT TCGTCGACGG GCAGGCGCTG
TACGCCCGGG AGGGCGAGAC CACCCTGGTG GTCAAGGCCA GCCGCCCTCT GGAACAACCC
ACCGTCGGCT TCGCCGGAGT TTCCGACGGC CTGACCGACC TCAAGGACGG CAAGCTCGAA
AACCGCTACG ACAGCACCGG GGATGCTGCT GGTAACGTCA CCATGCTGGC CCGCCTGCCC
TTGGCGGGCA GCGAAACCAC CCTCGACCTG GTGGTCGGCT TCGGCAAGAA CCGCCAGCAG
GCCGACCGGG CGGCAGATGC GACGCTGGCG CGCGGCTACG CCGAGGTGCT GGCCCACTAC
AACGGCGAGG GCGAGGCGAT CGGCTGGCGG GACTACCTGG CCTCCCTTTC CGGCCTGCCG
GCCATGTACG CGCAGAGTGC CGACAACGGC AAGCTGCTCA ACGTCAGCGC CATGGTGCTC
AAGGCACAGG AAGACAAGAG CAACGCCGGA GCGCTGATCG CCTCCCTGTC CAACCCCTGG
GGCGAGACGG TGCCGGCGGA AAGCGGCACC ACCGGCTACA AGGCGGTCTG GCCGCGCGAT
TTCTACCAGT GCGCGATGGC GCTGCTGGCC CTCGGCGACC GGCAGACACC GCAGGTCGCC
TTCGAATACC TGAAGAAGGT CCAGGTCAGC GAAGCCACCT CTCTCACGCA GGGCGACACT
TCGGCCTACA TCCACGAGCA GAAGCAGGAA GGCAAGACCG AAGACGCCGG CCCCGGCGCC
ACCGGCTGGT TCCTGCAGAA GACCCACGTC GATGGCGAGA TCGAATGGGT CGGGGTCCAG
CTCGACCAGA CCGCCATGCC CATCATGCTG GGATACAAGC TGTGGAAGGC CGGGATACTG
GACGACGCCC GGATCAAGCA CTGGTACCAG AACATGCTCA AGCCGGCGGC GGAATTCCTG
ACCAGGGGCG GCCAGGTGAA GGTCGGCTGG AACGACTGGA AGGTCGTCCC GCCGCAGACC
CAGCAGGAAC GCTGGGAAGA GCAATGGGGC TACTCGCCCT CGACCACGGC GGCGGTCATC
GCCGGCCTGG TGGCGGCCTC CGAAGTCGCC GGCCATGCCG GGGATGGCGA GGCGGCGCAG
CGTTTCCTGG ACGCCGCGAA GGGCTATTCC GACAAGCTGG AGGCGAGCAT GGTCACCCGG
AAAGGCAGCC TGGGTGACGG GCACTACTAT CTGCGCATCA CCCAGAACGA CGACCCCGAC
GACGGCGCCC CCCTGCTCGA CAACAACAGC CGCCCCGGAT TGCCGGAACA TCAGGTGCTC
GATGCCGGCT TCCTGGAGCT GGTGCGCTAC GGCGTACGCC CCGCCACCGA CCCGAACATC
GTCGGCAGCC TGGACGAACT CGATAGCCAG GAGCTGCCGG AAAACCTGAA GGTCAAATAC
CTGTTCAGCT ATCCGGGCGT CGAGGGCGAA TTCCCCGGCT GGCGCCGCTA CGGCAACGAC
GGCTACGGCG AGAGCGAAAT TTCCGCCATC AACTTCCCGG CCACCGAGGC CCCGCAGATG
AACTCCGGGC TGCGCGGCCG CGTCTGGCCG ATCTTCACCG GCGAGCGCGG CCATTACGAG
TTGGCCCGCA GCAAGGCCCG CTTGCCGGCA GGAATCGAGG CACTGAGCGC CGAGCAACTG
GCGCAGTTGA GGAACACTTA CGTCAAGGCC ATGGAGCTGT TCGCCAACGA GGGCCTGATG
CTGCCGGAGC AGGTCTGGGA CGGCGTAGGC GACAACAGCC GCCACGGCTA CGTGAAGGGC
GAAGGCACGG ACTCGGCCAC GCCCCTGGCC TGGAGCCATG CCGAATACGT CAAGCTGGTC
CGCTCGCTGA CCGACCAGAA GGTCTGGGAT CACTACCCGG TCGTCCCGGA AAAACTCGCC
AGATGA
 
Protein sequence
MQQPARFRKT LLSVLIGALG IAQAAGAANM APGAPGAAPF WSYSGKTGIG TSYEQYEDGQ 
YSPQAATGEV SKVWFSLARG VVTETMFGLI HEAQLREMQL VIQGPDFLDL EAQDTDSEIH
YLSVDDQGRP TSLAYKIVNR DRQGRYEIEK HIFTDPDADS LVIRVIFRSQ EPGIQAYVHI
DPAIGNDGSG DSAFVDGQAL YAREGETTLV VKASRPLEQP TVGFAGVSDG LTDLKDGKLE
NRYDSTGDAA GNVTMLARLP LAGSETTLDL VVGFGKNRQQ ADRAADATLA RGYAEVLAHY
NGEGEAIGWR DYLASLSGLP AMYAQSADNG KLLNVSAMVL KAQEDKSNAG ALIASLSNPW
GETVPAESGT TGYKAVWPRD FYQCAMALLA LGDRQTPQVA FEYLKKVQVS EATSLTQGDT
SAYIHEQKQE GKTEDAGPGA TGWFLQKTHV DGEIEWVGVQ LDQTAMPIML GYKLWKAGIL
DDARIKHWYQ NMLKPAAEFL TRGGQVKVGW NDWKVVPPQT QQERWEEQWG YSPSTTAAVI
AGLVAASEVA GHAGDGEAAQ RFLDAAKGYS DKLEASMVTR KGSLGDGHYY LRITQNDDPD
DGAPLLDNNS RPGLPEHQVL DAGFLELVRY GVRPATDPNI VGSLDELDSQ ELPENLKVKY
LFSYPGVEGE FPGWRRYGND GYGESEISAI NFPATEAPQM NSGLRGRVWP IFTGERGHYE
LARSKARLPA GIEALSAEQL AQLRNTYVKA MELFANEGLM LPEQVWDGVG DNSRHGYVKG
EGTDSATPLA WSHAEYVKLV RSLTDQKVWD HYPVVPEKLA R