Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_26920 |
Symbol | |
ID | 7761599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 2761254 |
End bp | 2762528 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643805569 |
Product | OprD family outer membrane porin |
Protein accession | YP_002799842 |
Protein GI | 226944769 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.291151 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACAACA ACAAGAAACC TCAAAGACAG CGCTACCTGA ATTCCATCCT CCACCTCCTG CCCCTGGCGC TCCTGCTGCC CGTCGCAAGC GCCCAGGCCG AACTCCTCGA GGATGCCAAG GGCACCCTGA CCCTGCGCAA CTTCTACATC CACCGCAACT TCGTCGACGA CCGCGCCACC CGCAGCAAGG CCGAGGAATG GACCCAGAGC TTCATCCTCG ACCTGCAGTC CGGCTATACC GAAGGCCCGG TCGGCTTCGG CATCGACATC CTCGGCCTCT GGTCGGTCAA GCTCGACGGC GGCAAGGGCA CCGGCGGCAC CCAGCTTTTG CCCGTCGGCA AGGACGGCAA GCCGGCCGAC GACTTCGGCC GCCTGGCGGT GGCCGGCAAG CTGCGCTTCT CGAAGACCGA GGCGAAGCTC GGCGAGTGGT CGCCGGCGCT GCCGATCCTG CGCTCCGACG ACGGCCGCTC GCTGCCGCAG ACCTTCCAGG GCGGCATGTT CACCTCCAAG GAGATCCGCA ACCTGACCCT CTACGGCGGG CGCTTCCGCG GCAACAGCCC GCGCGACGAC AGCAGCCTCG AGGACATGAG CTGGGTCGGC AACGCCAGCG TCACCTCCGA CCGCTTCAGC TTCGCCGGCG CCGAATACGC CTTCAACGAC AACCGCACCC TGCTCGGCGC CTGGTTCGGC CAACTGGAAG ACATCTACAA GCAGCGCTAC TTCCAGGTAG TGCACAGCCA GCCGCTGGGC AAGGACTGGA CCCTGGGCGC CAACCTCGGC TACTTCGACG GCGAGGAGGA CGGCAGCGCC CAGGCCGGCG ACCTGGACAA CAGCCTGCTG ACCGGGATGT TCTCGCTCAA GCATGGCGCG CACATCTTCT ACCTGGGCCT GCAGCGGGTC GGCGGCGACG ACCGCTGGCT GCGGGTCAAC GGCACCAGCG GCGGCACGGC GGCCAACGAC AGCTACAACG GCAGCTTCGA CAACCCCCGC GAGCGCTCCT GGCAAGTGCG CTACGACTAC GACTTCGCGC CCCTGGGGAT GCCCGGCCTG ACCCTGATGA CCCGCTACAT CAAGGGTCAC AACGTGCATG CGGGCGGTAT CGACGACGGC GAGGAGTGGA ACCGCGAGAC CCAGTTGAGC TACGTGGTGC AGAGCGGTCC GGCGAAGAAC CTGGCCCTGC GCTGGCGGAA CTCGACGGTG CGTCGCGACT GGGGCGCCGA CAACAAGTTC GACGACAACC GGCTGATCGT CCAGTACCCG CTCTCGCTGT TCTGA
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Protein sequence | MHNNKKPQRQ RYLNSILHLL PLALLLPVAS AQAELLEDAK GTLTLRNFYI HRNFVDDRAT RSKAEEWTQS FILDLQSGYT EGPVGFGIDI LGLWSVKLDG GKGTGGTQLL PVGKDGKPAD DFGRLAVAGK LRFSKTEAKL GEWSPALPIL RSDDGRSLPQ TFQGGMFTSK EIRNLTLYGG RFRGNSPRDD SSLEDMSWVG NASVTSDRFS FAGAEYAFND NRTLLGAWFG QLEDIYKQRY FQVVHSQPLG KDWTLGANLG YFDGEEDGSA QAGDLDNSLL TGMFSLKHGA HIFYLGLQRV GGDDRWLRVN GTSGGTAAND SYNGSFDNPR ERSWQVRYDY DFAPLGMPGL TLMTRYIKGH NVHAGGIDDG EEWNRETQLS YVVQSGPAKN LALRWRNSTV RRDWGADNKF DDNRLIVQYP LSLF
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