Gene Avin_26920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_26920 
Symbol 
ID7761599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2761254 
End bp2762528 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content67% 
IMG OID643805569 
ProductOprD family outer membrane porin 
Protein accessionYP_002799842 
Protein GI226944769 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.291151 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAACA ACAAGAAACC TCAAAGACAG CGCTACCTGA ATTCCATCCT CCACCTCCTG 
CCCCTGGCGC TCCTGCTGCC CGTCGCAAGC GCCCAGGCCG AACTCCTCGA GGATGCCAAG
GGCACCCTGA CCCTGCGCAA CTTCTACATC CACCGCAACT TCGTCGACGA CCGCGCCACC
CGCAGCAAGG CCGAGGAATG GACCCAGAGC TTCATCCTCG ACCTGCAGTC CGGCTATACC
GAAGGCCCGG TCGGCTTCGG CATCGACATC CTCGGCCTCT GGTCGGTCAA GCTCGACGGC
GGCAAGGGCA CCGGCGGCAC CCAGCTTTTG CCCGTCGGCA AGGACGGCAA GCCGGCCGAC
GACTTCGGCC GCCTGGCGGT GGCCGGCAAG CTGCGCTTCT CGAAGACCGA GGCGAAGCTC
GGCGAGTGGT CGCCGGCGCT GCCGATCCTG CGCTCCGACG ACGGCCGCTC GCTGCCGCAG
ACCTTCCAGG GCGGCATGTT CACCTCCAAG GAGATCCGCA ACCTGACCCT CTACGGCGGG
CGCTTCCGCG GCAACAGCCC GCGCGACGAC AGCAGCCTCG AGGACATGAG CTGGGTCGGC
AACGCCAGCG TCACCTCCGA CCGCTTCAGC TTCGCCGGCG CCGAATACGC CTTCAACGAC
AACCGCACCC TGCTCGGCGC CTGGTTCGGC CAACTGGAAG ACATCTACAA GCAGCGCTAC
TTCCAGGTAG TGCACAGCCA GCCGCTGGGC AAGGACTGGA CCCTGGGCGC CAACCTCGGC
TACTTCGACG GCGAGGAGGA CGGCAGCGCC CAGGCCGGCG ACCTGGACAA CAGCCTGCTG
ACCGGGATGT TCTCGCTCAA GCATGGCGCG CACATCTTCT ACCTGGGCCT GCAGCGGGTC
GGCGGCGACG ACCGCTGGCT GCGGGTCAAC GGCACCAGCG GCGGCACGGC GGCCAACGAC
AGCTACAACG GCAGCTTCGA CAACCCCCGC GAGCGCTCCT GGCAAGTGCG CTACGACTAC
GACTTCGCGC CCCTGGGGAT GCCCGGCCTG ACCCTGATGA CCCGCTACAT CAAGGGTCAC
AACGTGCATG CGGGCGGTAT CGACGACGGC GAGGAGTGGA ACCGCGAGAC CCAGTTGAGC
TACGTGGTGC AGAGCGGTCC GGCGAAGAAC CTGGCCCTGC GCTGGCGGAA CTCGACGGTG
CGTCGCGACT GGGGCGCCGA CAACAAGTTC GACGACAACC GGCTGATCGT CCAGTACCCG
CTCTCGCTGT TCTGA
 
Protein sequence
MHNNKKPQRQ RYLNSILHLL PLALLLPVAS AQAELLEDAK GTLTLRNFYI HRNFVDDRAT 
RSKAEEWTQS FILDLQSGYT EGPVGFGIDI LGLWSVKLDG GKGTGGTQLL PVGKDGKPAD
DFGRLAVAGK LRFSKTEAKL GEWSPALPIL RSDDGRSLPQ TFQGGMFTSK EIRNLTLYGG
RFRGNSPRDD SSLEDMSWVG NASVTSDRFS FAGAEYAFND NRTLLGAWFG QLEDIYKQRY
FQVVHSQPLG KDWTLGANLG YFDGEEDGSA QAGDLDNSLL TGMFSLKHGA HIFYLGLQRV
GGDDRWLRVN GTSGGTAAND SYNGSFDNPR ERSWQVRYDY DFAPLGMPGL TLMTRYIKGH
NVHAGGIDDG EEWNRETQLS YVVQSGPAKN LALRWRNSTV RRDWGADNKF DDNRLIVQYP
LSLF