Gene Avin_26730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_26730 
Symbol 
ID7761581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2741800 
End bp2743167 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content69% 
IMG OID643805551 
Producthypothetical protein 
Protein accessionYP_002799824 
Protein GI226944751 
COG category[S] Function unknown 
COG ID[COG3522] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03353] type VI secretion protein, VC_A0114 family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTCC ATAGTCCGAT TTCCACGATT CCCGCTGTAT TGCGCCAACG TGTGGTGTGG 
AGCGAGGGCA TGTTTCTCCG GCCCCAGCAT TTCCAGCAGT TGGAGCGTTA TCTCGAGCAT
TACGTGCAGG CGCGTTGCCT GCCCACGCAG GGATTCCACT GGGGCTGGCA GCAACTGGAA
GTCGATCGCC AGGCGCTGGC GCTGGGCAAG GTCGCCCTGC TCGGCGGGAG CGGAACGATG
CCGGACGGCA CGCCCTTCGC CTTCGGCGGC GACGATGCGC CGGCGGCGCT GGAGATTCCC
GCCGACCTCA AGAACCAGAC CCTGGTGCTG GCGCTGCCGC TGTGGCGCGC CGGGGCCAGC
GAGACGGGCT GGAGCCGGGA CGGCGAGCCG GCCTGGAGCC GCTACCGGGT GACGGATTTC
GAGGTCCCGG ATGCCAACAG CGAGCCGTTC GGTCCCGCGC TCCTGCAGGT GGGACGGCTC
GATCTGCGCC TGATGACGGA AGCGGCCCTG AACGGCGACT GGCAGTCGCT CGGCCTGGTC
CGCGTGCTGG AGCGGCGCAA CGACGGCCAG GTGCTGCTGG ACGAGGAGTA CATCCCGCCG
CTGCTCTCGG CCACGCGCCA CCCGGTGCTG CGCGGCTGCC TGGACGAACT GCACGGCCTG
CTGCGGCAGC GCGGCGAGGC GCTGGCCGAA CGCCTCGCCC AGCCGGGACG CGGCGGCGTG
GCCGAAGTGG GCGACTTCCT GCTGCTGGCG CTGGTCAACC GCTACACGGC CGTGACCTGG
CGCGCGCGCC AGGCGGCCTG CGTGCATCCC TCGCGACTGT TCGACGAGTG GCTCGAACTG
GCCAGCGAAC TGGCGACCCA CACCCACGAG CGGCGCCGCC CCCAGGTGTT TCCCGAGTAC
CGCCACGACG CGCTGCGGGA CAGCTTCGCG CCGCTGATGG CGGAGCTGCG CCGCGCCCTG
TCCAGCGTGC TGGAGCAGCA CGCCATCGCG ATTGCCCTGC AGGAGCGCGG CAGCGGCGTG
TGCGTGGCGC AGATCCCGTC GCTGGAACTG ATCCGCGAGG CCGGCTTCGT GCTGGCGGTA
CATGCCGACG TGCCCGCCGA AACCCTGCGC GCGCGCTTTC CGGCGCAGCT CAAGCTGGGC
GCGGTGGAGC GCATCCGCGA CCTGGTTTCG CTGCAACTGC CGGGCATCGG TGTGCGCCTG
TTGCCGGTGG CGCCGCGGCA ACTGCCTTAC CACGCCGGCC ACAGCTATTT CGAGCTGGAG
AAGGGCAGCG AATTCTGGAA GCAACTGGAG AAGTCGGGAA GCCTGGCGCT GCACGTGGCC
GGCGAGTTTC CCGGTTTGAA GATGGAATTC TGGGCGATAC GCGAATGA
 
Protein sequence
MKFHSPISTI PAVLRQRVVW SEGMFLRPQH FQQLERYLEH YVQARCLPTQ GFHWGWQQLE 
VDRQALALGK VALLGGSGTM PDGTPFAFGG DDAPAALEIP ADLKNQTLVL ALPLWRAGAS
ETGWSRDGEP AWSRYRVTDF EVPDANSEPF GPALLQVGRL DLRLMTEAAL NGDWQSLGLV
RVLERRNDGQ VLLDEEYIPP LLSATRHPVL RGCLDELHGL LRQRGEALAE RLAQPGRGGV
AEVGDFLLLA LVNRYTAVTW RARQAACVHP SRLFDEWLEL ASELATHTHE RRRPQVFPEY
RHDALRDSFA PLMAELRRAL SSVLEQHAIA IALQERGSGV CVAQIPSLEL IREAGFVLAV
HADVPAETLR ARFPAQLKLG AVERIRDLVS LQLPGIGVRL LPVAPRQLPY HAGHSYFELE
KGSEFWKQLE KSGSLALHVA GEFPGLKMEF WAIRE