Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_26650 |
Symbol | |
ID | 7761573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 2730697 |
End bp | 2731179 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643805543 |
Product | hypothetical protein |
Protein accession | YP_002799816 |
Protein GI | 226944743 |
COG category | [S] Function unknown |
COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.410921 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCACCTGA AGATCGAGGG CGTCCAGGGC GAGTCCCAGG AGTCCCAACA CGCTGCCTGG CTCGACATCA AGTCGTTCAC CTGGGGAATC AGCCAGCCCG GCTCCCTGGA TTCCGGCGGC GGCGGCACCC CCGGCCGGGC CAGCTTCACC GACCTGCACG TGGTTTCCTA CGTGGAGGCC TCCGCGCCGA CCGCGTTCAA GAAGTGCGCC AACGGCACCA GCCTGGGAAC GGTGGAACTG TCCTGCTCCC GGCTCTCCGA CGGCGACAAG ATGGTCTTCA TGACCATCAC CCTGACCAAC GTGCTGGTCA CCAAGGCGGA CATCAAGGGC GTCGACAGGG ACGACGAGCA GGAGCGCCTG CTCATCGAGT ACGCCTTCCA GGCCCCCGAG GTGGAATTCG GCTACACGCC CCAGCAGGAC GACGGCAGCG CGGGCGGCGA GGTCACCATG GGCTGGAACA TCCCCCAGAA CACCGAGCTC TGA
|
Protein sequence | MHLKIEGVQG ESQESQHAAW LDIKSFTWGI SQPGSLDSGG GGTPGRASFT DLHVVSYVEA SAPTAFKKCA NGTSLGTVEL SCSRLSDGDK MVFMTITLTN VLVTKADIKG VDRDDEQERL LIEYAFQAPE VEFGYTPQQD DGSAGGEVTM GWNIPQNTEL
|
| |