Gene Avin_26650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_26650 
Symbol 
ID7761573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2730697 
End bp2731179 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content66% 
IMG OID643805543 
Producthypothetical protein 
Protein accessionYP_002799816 
Protein GI226944743 
COG category[S] Function unknown 
COG ID[COG3157] Hemolysin-coregulated protein (uncharacterized) 
TIGRFAM ID[TIGR03344] type VI secretion system effector, Hcp1 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.410921 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACCTGA AGATCGAGGG CGTCCAGGGC GAGTCCCAGG AGTCCCAACA CGCTGCCTGG 
CTCGACATCA AGTCGTTCAC CTGGGGAATC AGCCAGCCCG GCTCCCTGGA TTCCGGCGGC
GGCGGCACCC CCGGCCGGGC CAGCTTCACC GACCTGCACG TGGTTTCCTA CGTGGAGGCC
TCCGCGCCGA CCGCGTTCAA GAAGTGCGCC AACGGCACCA GCCTGGGAAC GGTGGAACTG
TCCTGCTCCC GGCTCTCCGA CGGCGACAAG ATGGTCTTCA TGACCATCAC CCTGACCAAC
GTGCTGGTCA CCAAGGCGGA CATCAAGGGC GTCGACAGGG ACGACGAGCA GGAGCGCCTG
CTCATCGAGT ACGCCTTCCA GGCCCCCGAG GTGGAATTCG GCTACACGCC CCAGCAGGAC
GACGGCAGCG CGGGCGGCGA GGTCACCATG GGCTGGAACA TCCCCCAGAA CACCGAGCTC
TGA
 
Protein sequence
MHLKIEGVQG ESQESQHAAW LDIKSFTWGI SQPGSLDSGG GGTPGRASFT DLHVVSYVEA 
SAPTAFKKCA NGTSLGTVEL SCSRLSDGDK MVFMTITLTN VLVTKADIKG VDRDDEQERL
LIEYAFQAPE VEFGYTPQQD DGSAGGEVTM GWNIPQNTEL