Gene Avin_26640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_26640 
Symbol 
ID7761572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2730052 
End bp2730594 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content69% 
IMG OID643805542 
Producthypothetical protein 
Protein accessionYP_002799815 
Protein GI226944742 
COG category[S] Function unknown 
COG ID[COG3518] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03357] type VI secretion system lysozyme-related protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.54439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGATC CGCTGCACAC GCCCAGGGAC AGGCGGCAAG CGCGCGGCAA GCGCGACCGC 
CTGCGCCCGG CGCTGCTCGA CCGTCTGACC GACGACGAGC CCCTGCAACG CACGGAACCC
CTGACGCCGG GCGCCAGCAC CGGCGAGTTG CGCGCCGCGG TGCTGCGCGA CCTGGCCTGG
CTGTTCAACA CCATCAGCAT GGCCGCCGAC CTGGATCTGG CGCCGTTCGG CGAAGCGCAG
CGCTCGGTGC TGAACTACGG CGTGCTGCCG CTGGCCGGCA AGCGCATTTC CGAGCTGGAC
TGCCAGGAAC TCGCCTCCCG GCTGCGCCTG GCCATCCTGC GCTTCGAACC GCGCCTGCTG
CCGGACAGCG TCGAGGTGCT GCACATCGAC GAGCCGGACA AGCGGCTCAT GCACCACAAC
GAACTGGTCT TCGAGATCCG CGCCCGGCTC TGGTCGGCGC CGTACCCGGT GGAATTCCGC
GTGCGTTCCG AACTGGATCT GGAAAGCGGC CAATCCCTGT TGCACGACCT GGCGATCGAC
TGA
 
Protein sequence
MADPLHTPRD RRQARGKRDR LRPALLDRLT DDEPLQRTEP LTPGASTGEL RAAVLRDLAW 
LFNTISMAAD LDLAPFGEAQ RSVLNYGVLP LAGKRISELD CQELASRLRL AILRFEPRLL
PDSVEVLHID EPDKRLMHHN ELVFEIRARL WSAPYPVEFR VRSELDLESG QSLLHDLAID