| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_25610 |
|---|
| Symbol | |
|---|
| ID | 7761473 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 2605089 |
|---|
| End bp | 2606072 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643805443 |
|---|
| Product | pyoverdine biosynthesis regulatory protein-TauD/TfdA family protein |
|---|
| Protein accession | YP_002799716 |
|---|
| Protein GI | 226944643 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAT TGTCGCGCTT CGATATCCAT CCGCTGCAGG CGGGAAAGGG CGATCTGCCG
ATGCTCGTGC AAGCGCCGGA GCCGGGAGTG AATCTGCTGG AGGCATTCGC CGAACTGAAA
CCCCTGGTCG ACAGGTATCT GCTCGACTGC GGAGGCATCC TGTTCCGCGG TTTCCAGGTC
GCTGGCATCG AGGACTTCCG GGAGTTCGCG GCCGCCTTCG GTCATCCGCT GCTGCGCTAC
GAATTCGGCT CCACTCCGCG AACCAATGTC GCGAGCGGGA TCTACACCTC CACGGAATAT
CCCGCTCACC AGGCCATCCC GCTCCACAAC GAGCAGGCCT ACACGCTCGA ATGGCCGCTG
AAAATCTGGT TCTACAGCGT GATTCCGGCG GAAACCGGCG GCGAGACGCC GATCGCCGAC
AGCCGGGAAA TCTACCGACG GATACCGCTA CGTATCCGCG AGCGTTTCAT CGAGAAAAAA
CTGATGTACG TGCGCAACTA TGGCAACGGC CTGGACGTAG CCTGGGAGCA GGTGTTCAAC
ACGGACGATC GCCAGGCCGT CGAGTCGTAC TGCCGCGCCC ATGCGATCCA ATGCGACTGG
AAGGACGACG GCGAACTTCG AACCCGTCAG ATCTGCCAGG CCGTCGCCTG TCATCCGGTG
ACGAAGGACA TGGTCTGGTT CAACCAGGCC CACCTGTTCC ACGTCTCCAA CCTGCCATGG
GAAGTGCGCG AAAGCCTCCT GGAGGTCGTG GACGAGGAAG ATCTGCCACG CAACGTCTAC
TACGGCGACG GATCGCCGAT CGAAGATGGC CTGCTCGACG AGATACGCGG CGTGCTGAAC
AAGTGCACCA TCAGCTTCCC CTGGCTGCAG GACGACGTGA TGATGCTCGA CAACATGCTG
GCCGCCCATG CGCGCTCCCC CTTCACCGGC AAGCGCAAGC TCGTGGTGGC GATGGCCGAG
GGGTATTCGG AAGAGTTGCC ATGA
|
|---|
| Protein sequence | MSELSRFDIH PLQAGKGDLP MLVQAPEPGV NLLEAFAELK PLVDRYLLDC GGILFRGFQV
AGIEDFREFA AAFGHPLLRY EFGSTPRTNV ASGIYTSTEY PAHQAIPLHN EQAYTLEWPL
KIWFYSVIPA ETGGETPIAD SREIYRRIPL RIRERFIEKK LMYVRNYGNG LDVAWEQVFN
TDDRQAVESY CRAHAIQCDW KDDGELRTRQ ICQAVACHPV TKDMVWFNQA HLFHVSNLPW
EVRESLLEVV DEEDLPRNVY YGDGSPIEDG LLDEIRGVLN KCTISFPWLQ DDVMMLDNML
AAHARSPFTG KRKLVVAMAE GYSEELP
|
|---|
| |