Gene Avin_25080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_25080 
Symbol 
ID7761422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2509660 
End bp2510235 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content62% 
IMG OID643805392 
ProductTranscriptional regulator, TetR family 
Protein accessionYP_002799667 
Protein GI226944594 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGTC CAAGAAGCGA AGAAAAGCGC CTGGCCCTGC TGAACGCCGC CGCCGAGACC 
GTGGCCGAGC ATGGCTTGGC TGCGTCCCCG ACCTCGCTGA TCGCGAAGAA GGCCGGCGTC
GCCGAAGGAA CGCTCTTTCG CTATTTCCCG ACGAAGGACG ATCTCCTGAA CGAGCTTTAC
CTCCACCTCA AGCAGGACAT GTGCGAGGCG ATGAAGAAGC ATTACACCGC CACCGCCGCA
TCCCCCCTCC GCGAACGCGC ACAATCCCTG TGGAACAGCT ACATCGACTG GGGGCTCGCC
CATCCCTTGG CCAACAAGGC GGTCAACCAG CTTGCCGTCT CGTCGTCCCT CACCCCGGAA
ACGCTTGCCA AGGCACAGGC CATGTTCCCG GAGGCCGTTG CCGAGACAGA ACTCTCGGGG
AACCAGGTGT TCGCGGGACA AACGGACTTC GCCGATGCCG TCTTCCTCGC GCTTGCCGAT
ACCACGATGG CCTTTGCCGC GCGGCACCCC AGGAAAGCCA AAGCCTACAA GGCCAGCGGC
TTCGAGGCCA TGTGGAAGAT GTTCAATGAT GATTGA
 
Protein sequence
MARPRSEEKR LALLNAAAET VAEHGLAASP TSLIAKKAGV AEGTLFRYFP TKDDLLNELY 
LHLKQDMCEA MKKHYTATAA SPLRERAQSL WNSYIDWGLA HPLANKAVNQ LAVSSSLTPE
TLAKAQAMFP EAVAETELSG NQVFAGQTDF ADAVFLALAD TTMAFAARHP RKAKAYKASG
FEAMWKMFND D