Gene Avin_25040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_25040 
SymboluvrC 
ID7761418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2506149 
End bp2507972 
Gene Length1824 bp 
Protein Length607 aa 
Translation table11 
GC content64% 
IMG OID643805387 
Productexcinuclease ABC subunit C 
Protein accessionYP_002799663 
Protein GI226944590 
COG category[L] Replication, recombination and repair 
COG ID[COG0322] Nuclease subunit of the excinuclease complex 
TIGRFAM ID[TIGR00194] excinuclease ABC, C subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGAATG CCTTCGACGG TGCGGCTTTT CTGGCTCACT GCAGCAGTCA TCCCGGCGTC 
TACCGGATGC TGGATGCGAA AGGCGAGCTG CTCTACGTCG GGAAGGCCAA GAATCTCAGG
AAACGCTTGT CCAGCTATTT CCGCACGAGC GGGCTGGCAC CGAAGACGGC TGCCTTGGTG
GCGCGGATAG CCCAAGTCGA AACCACCATC ACCGCCAACG AGACCGAGGC GCTGCTGCTC
GAGCAGACCC TGATCAAGGA GTGGCGACCG CCGTACAACA TCCTGCTGCG CGACGACAAG
TCCTATCCCT ATGTGTTCCT GTCCGATGGC GCCTTTCCCC GGCTCGGTAT CCACAGGGGA
GCCAAGCAGC GGAAGGGACG CTATTTCGGT CCTTATCCCA GTGCCGGTTC AATACGCGAA
AGCCTGGGTC TTCTGCAGAA GGCCTTTCAG GTCCGCCAGT GCGAGGACAG CTACTTCAGA
AACCGGACGC GTCCCTGCCT GCAGCATCAG ATCAGGCGCT GCAAGGCTCC CTGCGTCGGC
CTGGTCGAGC CGGCCGAATA TGCCGAGGAT GTACGTCATT CGGTGATGTT TCTCGAAGGG
CGCAGCAACG CCCTGGCCGA GGAGCTTTCC GCCGCCATGG AGCGGGCGGC TGTCCACCTG
GATTTCGAGC GCGCCGCCGA GCTGCGTGAC CAGATCGCTC TGCTGCGCCG GGTCCAGGAT
CAGCAGAGCA TGGAGGGGGG CAGCGGCGAC GTGGACGTGC TGGCTGCCGT GGTCAAGCCC
GGTGGCGCCT GCGTCCATCT GATCAGCGTG CGTGGGGGGC GCGTGCTGGG CAGCAAGAAC
TTCTTCCCGC AGGTGGGGAT CGAGGAGGAG GTGGGGGATG TCCTGGCAGC CTTTCTCGGC
CAGTACTACC TGGCCAACCC GGAGCGCGAT CTACCCGGCG AAATCATCGT CAATGCCACG
CACGAAGACT TCCCTGCGCT CGTCCTGGCC TTGACGGAGC AGCGGAGCCG CGAGCTGCAC
ATTCGCCATC GGGTGCGCGC CACGCGGGCG CGCTGGCAGC AGTTGGCGAT TGCCAATGCG
GAGCAGGCGC TGTCCGCGCG GCTGGCCCAT CGTCAGCATC TGGCGGCTCG TTTCGAGGCC
CTGGCCGAAG CGCTTGACCT GGATGCTCCG CCCCTGCGCA TGGAGTGCTT CGATATCAGC
CATTCGAGTG GCGAGGCGAC CGTCGCCTCC TGCGTGGTAT TCGGACCCGA AGGCGCCCTG
AAGGGCGAGT ATCGTCGCTA CAACATCGAG GGCGTCACCG CCGGCGATGA TTACGCCGCC
ATGCAGCAAG CGTTGACTCG CCGTTTCGGC AAGTTGCGGG AAGGCGAGGG CAAGCTTCCC
GACATTCTCC TGGTGGACGG CGGCAAGGGA CAACTGGCGA TCGCGCAGGA GGTTTTGCGG
GAACTGGCGG TACCGGACCT GATCCTGCTC GGTGTGGCCA AGGGCGTCAC CCGTAAGCCC
GGTCTGGAAA CCCTTTATCT GAACGATGCC GTCCACGAAT TCACATTGCC GGCCGATTCG
CCGGCCCTGC ATCTGATCCA GCAGATCCGC GATGAGGCCC ACCGTTTCGC CATCACCGGG
CACCGGGCAC GGCGGGGCAA GGCACGGCGT ACCTCCAGTC TGGAGGAGGT CGCCGGGGTG
GGGCCGAAGC GCCGGCGCGA ACTGCTCAAG TTTTTCGGCG GGCTCCAGGA GCTTTCCCGG
GCAAGCATCG ATGAAATCGC CAAGGCTCCT GGGATCAGCA AAAAGCTCGC CGATTCGATT
TATGCGGCCC TGCACAGCGA GTAG
 
Protein sequence
MGNAFDGAAF LAHCSSHPGV YRMLDAKGEL LYVGKAKNLR KRLSSYFRTS GLAPKTAALV 
ARIAQVETTI TANETEALLL EQTLIKEWRP PYNILLRDDK SYPYVFLSDG AFPRLGIHRG
AKQRKGRYFG PYPSAGSIRE SLGLLQKAFQ VRQCEDSYFR NRTRPCLQHQ IRRCKAPCVG
LVEPAEYAED VRHSVMFLEG RSNALAEELS AAMERAAVHL DFERAAELRD QIALLRRVQD
QQSMEGGSGD VDVLAAVVKP GGACVHLISV RGGRVLGSKN FFPQVGIEEE VGDVLAAFLG
QYYLANPERD LPGEIIVNAT HEDFPALVLA LTEQRSRELH IRHRVRATRA RWQQLAIANA
EQALSARLAH RQHLAARFEA LAEALDLDAP PLRMECFDIS HSSGEATVAS CVVFGPEGAL
KGEYRRYNIE GVTAGDDYAA MQQALTRRFG KLREGEGKLP DILLVDGGKG QLAIAQEVLR
ELAVPDLILL GVAKGVTRKP GLETLYLNDA VHEFTLPADS PALHLIQQIR DEAHRFAITG
HRARRGKARR TSSLEEVAGV GPKRRRELLK FFGGLQELSR ASIDEIAKAP GISKKLADSI
YAALHSE