Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_25040 |
Symbol | uvrC |
ID | 7761418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 2506149 |
End bp | 2507972 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643805387 |
Product | excinuclease ABC subunit C |
Protein accession | YP_002799663 |
Protein GI | 226944590 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGAATG CCTTCGACGG TGCGGCTTTT CTGGCTCACT GCAGCAGTCA TCCCGGCGTC TACCGGATGC TGGATGCGAA AGGCGAGCTG CTCTACGTCG GGAAGGCCAA GAATCTCAGG AAACGCTTGT CCAGCTATTT CCGCACGAGC GGGCTGGCAC CGAAGACGGC TGCCTTGGTG GCGCGGATAG CCCAAGTCGA AACCACCATC ACCGCCAACG AGACCGAGGC GCTGCTGCTC GAGCAGACCC TGATCAAGGA GTGGCGACCG CCGTACAACA TCCTGCTGCG CGACGACAAG TCCTATCCCT ATGTGTTCCT GTCCGATGGC GCCTTTCCCC GGCTCGGTAT CCACAGGGGA GCCAAGCAGC GGAAGGGACG CTATTTCGGT CCTTATCCCA GTGCCGGTTC AATACGCGAA AGCCTGGGTC TTCTGCAGAA GGCCTTTCAG GTCCGCCAGT GCGAGGACAG CTACTTCAGA AACCGGACGC GTCCCTGCCT GCAGCATCAG ATCAGGCGCT GCAAGGCTCC CTGCGTCGGC CTGGTCGAGC CGGCCGAATA TGCCGAGGAT GTACGTCATT CGGTGATGTT TCTCGAAGGG CGCAGCAACG CCCTGGCCGA GGAGCTTTCC GCCGCCATGG AGCGGGCGGC TGTCCACCTG GATTTCGAGC GCGCCGCCGA GCTGCGTGAC CAGATCGCTC TGCTGCGCCG GGTCCAGGAT CAGCAGAGCA TGGAGGGGGG CAGCGGCGAC GTGGACGTGC TGGCTGCCGT GGTCAAGCCC GGTGGCGCCT GCGTCCATCT GATCAGCGTG CGTGGGGGGC GCGTGCTGGG CAGCAAGAAC TTCTTCCCGC AGGTGGGGAT CGAGGAGGAG GTGGGGGATG TCCTGGCAGC CTTTCTCGGC CAGTACTACC TGGCCAACCC GGAGCGCGAT CTACCCGGCG AAATCATCGT CAATGCCACG CACGAAGACT TCCCTGCGCT CGTCCTGGCC TTGACGGAGC AGCGGAGCCG CGAGCTGCAC ATTCGCCATC GGGTGCGCGC CACGCGGGCG CGCTGGCAGC AGTTGGCGAT TGCCAATGCG GAGCAGGCGC TGTCCGCGCG GCTGGCCCAT CGTCAGCATC TGGCGGCTCG TTTCGAGGCC CTGGCCGAAG CGCTTGACCT GGATGCTCCG CCCCTGCGCA TGGAGTGCTT CGATATCAGC CATTCGAGTG GCGAGGCGAC CGTCGCCTCC TGCGTGGTAT TCGGACCCGA AGGCGCCCTG AAGGGCGAGT ATCGTCGCTA CAACATCGAG GGCGTCACCG CCGGCGATGA TTACGCCGCC ATGCAGCAAG CGTTGACTCG CCGTTTCGGC AAGTTGCGGG AAGGCGAGGG CAAGCTTCCC GACATTCTCC TGGTGGACGG CGGCAAGGGA CAACTGGCGA TCGCGCAGGA GGTTTTGCGG GAACTGGCGG TACCGGACCT GATCCTGCTC GGTGTGGCCA AGGGCGTCAC CCGTAAGCCC GGTCTGGAAA CCCTTTATCT GAACGATGCC GTCCACGAAT TCACATTGCC GGCCGATTCG CCGGCCCTGC ATCTGATCCA GCAGATCCGC GATGAGGCCC ACCGTTTCGC CATCACCGGG CACCGGGCAC GGCGGGGCAA GGCACGGCGT ACCTCCAGTC TGGAGGAGGT CGCCGGGGTG GGGCCGAAGC GCCGGCGCGA ACTGCTCAAG TTTTTCGGCG GGCTCCAGGA GCTTTCCCGG GCAAGCATCG ATGAAATCGC CAAGGCTCCT GGGATCAGCA AAAAGCTCGC CGATTCGATT TATGCGGCCC TGCACAGCGA GTAG
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Protein sequence | MGNAFDGAAF LAHCSSHPGV YRMLDAKGEL LYVGKAKNLR KRLSSYFRTS GLAPKTAALV ARIAQVETTI TANETEALLL EQTLIKEWRP PYNILLRDDK SYPYVFLSDG AFPRLGIHRG AKQRKGRYFG PYPSAGSIRE SLGLLQKAFQ VRQCEDSYFR NRTRPCLQHQ IRRCKAPCVG LVEPAEYAED VRHSVMFLEG RSNALAEELS AAMERAAVHL DFERAAELRD QIALLRRVQD QQSMEGGSGD VDVLAAVVKP GGACVHLISV RGGRVLGSKN FFPQVGIEEE VGDVLAAFLG QYYLANPERD LPGEIIVNAT HEDFPALVLA LTEQRSRELH IRHRVRATRA RWQQLAIANA EQALSARLAH RQHLAARFEA LAEALDLDAP PLRMECFDIS HSSGEATVAS CVVFGPEGAL KGEYRRYNIE GVTAGDDYAA MQQALTRRFG KLREGEGKLP DILLVDGGKG QLAIAQEVLR ELAVPDLILL GVAKGVTRKP GLETLYLNDA VHEFTLPADS PALHLIQQIR DEAHRFAITG HRARRGKARR TSSLEEVAGV GPKRRRELLK FFGGLQELSR ASIDEIAKAP GISKKLADSI YAALHSE
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