| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_24970 |
|---|
| Symbol | |
|---|
| ID | 7761411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 2499734 |
|---|
| End bp | 2501395 |
|---|
| Gene Length | 1662 bp |
|---|
| Protein Length | 553 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643805379 |
|---|
| Product | Sulphate transporter-SulP-type |
|---|
| Protein accession | YP_002799656 |
|---|
| Protein GI | 226944583 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
|---|
| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor
[TIGR00815] high affinity sulphate transporter 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGATCG CAATACGTGA GGCATGGCAG GCCGGTCTGC TGCGCCGGGA GCACTGGCTG
CGCAACCTGG TCGCCGGCGT CATCGTCGGT GTCGTGGCGC TGCCGCTGGC CATGGCCTTC
GGCATCGCCT CCGGGGTGAA GCCGGAGCAG GGCATCTATA CCGCCATCGT CGGCGGCCTG
CTGGTTTCCC TGTTCGGCGG CAGCCGGCTG CAGATCGCCG GTCCGACCGG CGCCTTCATC
GTCATCCTGG CCGGGGTGAC CGCCGAGCAC GGGGTCGATG GCCTGCAGAT CGCGACTCTG
ATGGCCGGCG GCATTCTCCT GCTGCTCGGT GTCGGCCGCC TGGGGACGGT CATCAAGTAC
ATTCCGGACC CGGTCATCGT CGGTTTCACG GCCGGCATCG GGGTGATCAT CTGGGTCAGC
CAGTGGAAGG ATTTCTTCGG ACTGCCGGCA GTGGCGGGCA CGCATTTCCA CGAGAAATTC
TGGCACCTGC TGCAGTCGCT GCCGCAACTG CACCTGCCGA CCACGCTGCT GGCCCTGGCC
AGCCTGGCGC TGGTCATCTT CGCACCGCGC CTGCGAATGC TGCGGCGCGT TCCCGGTCCG
CTGATCGCGA TGGTCGCCGC CACCGTCATC CAGTCGTTCT TCCGGTTCGA CGGAGTGGCC
ACCATCGGCA GCGCTTTCGG CGGCATTCCC CAGGGATTGC CGCAGCTCGG GCTGCCGGAG
ATCACTCCGT CGCGGCTGAT CGAACTGATC GGCCCGGCCT TCGCCATCGC CATGCTCGGC
GCCATCGAAT CGCTGCTCTC CGCCGTGGTC GCCGACGGCA TGGGCGGAAC CAAGCACGAC
TCCAACCAGG AATTGATCGG TCAGGGCATC GCCAACCTGG CCACGCCGCT GTTCGGCGGC
TTCGCCGCCA CCGGAGCGAT CGCCCGTACC GCGACCAACA TCCGCAACGG CGGCAACAGT
CCCCTGGCCG GCATCGTCCA TGCGCTCGTG CTGGTGCTGA TCCTGCTGTT CCTGGCGCCG
CTGGCGGCGA ACATTCCGCT GGCCGCGCTG GCCGCCATCC TCTTCGTGGT GGCCTGGAAC
ATGAGCGAGC TGAAGCACTT CAAGCGCATG CTGCGGCGGG CGCCCAGGGC GGACGTCGGC
ATTCTGCTGA TCACCTTCGG GTTGACGGTG TTCAGCGATC TGGTGATCGC GGTGAACATC
GGCGTGATCC TGGCCATGCT GCAGTTCATG CGCCGCATGG CCTCTTCGGT GGCCGTGCGG
CAGCAGCTCG AACGGGATCT GGAGCCGGAA CTGCTCGGCA ACGGGCATAG CCGGCTGCCC
GACGGGGTAC TGGTCTATAC CGTGGAGGGG CCGCTGTTCT TCGGCGCGGC GGAAACCTTC
GAGCGTGCGC TGGCCAGTAC CCATACCGAT CCGCGCCTGT TGATCATTCG CCTGAAGCGG
GTACCTTTCA TGGATATCAC CGGTCTACAG ACGCTGGAGG AAGTCATCCG GCAACTGGAA
AGACGCAGGA TCCGGGTCAA GCTCTGCGAA GCGAGCCCAC GGGTGCATGG CAAGCTGGAG
CGGGCGGGAA TACTGGAGTT GATCGGTGCA CGCGATTATC ACGCGAGCTT CGCCGAGGCC
CTGTCCGCCA GCGAGGAAAA GGCGGAGGTC ACGGCTTCCT GA
|
|---|
| Protein sequence | MMIAIREAWQ AGLLRREHWL RNLVAGVIVG VVALPLAMAF GIASGVKPEQ GIYTAIVGGL
LVSLFGGSRL QIAGPTGAFI VILAGVTAEH GVDGLQIATL MAGGILLLLG VGRLGTVIKY
IPDPVIVGFT AGIGVIIWVS QWKDFFGLPA VAGTHFHEKF WHLLQSLPQL HLPTTLLALA
SLALVIFAPR LRMLRRVPGP LIAMVAATVI QSFFRFDGVA TIGSAFGGIP QGLPQLGLPE
ITPSRLIELI GPAFAIAMLG AIESLLSAVV ADGMGGTKHD SNQELIGQGI ANLATPLFGG
FAATGAIART ATNIRNGGNS PLAGIVHALV LVLILLFLAP LAANIPLAAL AAILFVVAWN
MSELKHFKRM LRRAPRADVG ILLITFGLTV FSDLVIAVNI GVILAMLQFM RRMASSVAVR
QQLERDLEPE LLGNGHSRLP DGVLVYTVEG PLFFGAAETF ERALASTHTD PRLLIIRLKR
VPFMDITGLQ TLEEVIRQLE RRRIRVKLCE ASPRVHGKLE RAGILELIGA RDYHASFAEA
LSASEEKAEV TAS
|
|---|
| |