Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_24530 |
Symbol | kdpE |
ID | 7761367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 2450767 |
End bp | 2451465 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643805336 |
Product | Response regulator KdpE |
Protein accession | YP_002799613 |
Protein GI | 226944540 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0689152 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGGCG TGCAGCAAAG CATCCTGGTG ATCGACGACG AGGCGCAGAT CCGCAAGTTC CTGCGCATCA GCCTCGTCGC CCACGGTTAC CGGGTACTGG AGGCCGGCTG CGGTCGCGAG GGGCTGACGC TGGCGGCCGA GGCGCGGCCC GATCTGCTGG TGCTCGATCT GGGGCTGCCG GACATGGACG GCAAGGAACT GCTCGCCGAA CTGCGGCGCG ACTCCCAGGT GCCGGTGCTG GTGCTTTCGG TACGTGCCGG CGACGGCGAG AAGGTACTGG CGCTGGACGG CGGCGCCAAC GACTACGTGA CCAAGCCCTT CAGCATCCGT GAGCTGCTCG CCCGGGTGCG CGTGCTGCTG CGCCGGCCGG CTTCGCCCGG ACAGGGGCCG GGCACGCTGA ACTGCGGCCC GCTGGCGGTG GATCTGGACA ACCGGCGGGT CGACCTCGAC GGCCGGGAAA TCGCCCTGAC GCGCAAGGAG TACGACGTGC TGGCCATGCT CGCCCGCCAT CCGGGGCGCA TCGTCACCCA GCAGCAGTTG CTCAGGGATA TCTGGGGGCC GACCCATGTC GAGGACAGCC ATTACCTGCG GGTGGTGGTC GGTCACCTGC GCCAGAAGCT CGGCGACGAT CCCGCCGATC CCCGTTTCAT CGTCACCGAG GCGGGCATCG GTTACCGCCT GCGCGAGCAG GCCCCGTGA
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Protein sequence | MSGVQQSILV IDDEAQIRKF LRISLVAHGY RVLEAGCGRE GLTLAAEARP DLLVLDLGLP DMDGKELLAE LRRDSQVPVL VLSVRAGDGE KVLALDGGAN DYVTKPFSIR ELLARVRVLL RRPASPGQGP GTLNCGPLAV DLDNRRVDLD GREIALTRKE YDVLAMLARH PGRIVTQQQL LRDIWGPTHV EDSHYLRVVV GHLRQKLGDD PADPRFIVTE AGIGYRLREQ AP
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