Gene Avin_24360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_24360 
Symbol 
ID7761351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2429743 
End bp2431377 
Gene Length1635 bp 
Protein Length544 aa 
Translation table11 
GC content69% 
IMG OID643805321 
Productchemotaxis sensory transducer 
Protein accessionYP_002799598 
Protein GI226944525 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.249262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAGTC CGACGACGAG TCAGAAGCTC TGGGGGACCC TGGTGGCCGC CTGGCTGGCG 
ATGCTGGTAC TGGTGATCCT GGCGGCCTGG ATCATGCGCG GCATGATGTT CGAGGAGCGC
CGGGCCAAGG TCGAGAGCCA GGTCGAGATC GCGCTTTCGG CGCTGGGGGA TGTCGTCGCG
CAGGTCGAGC GCGGGGCCAT GAGCCGCGAG GAAGGGCAGG CGCGTGCGGC CGAACTGGTC
AAGAGCATGC GTTACGACGA CGGGCGCGGC TATTTCTTCG TGTTCGATGC CGACATGCGC
AACATCGCCC ATCCGACCAT CGAGGCGGGC GCCCGGCTGT CGGAGTTCAA GGATGCCGGC
GGGCGCAACC TGTTCGTCGG TTTCGCCAAC GCGGTGGACC AGGGGCGGGG GCGCGCCTAT
TTCGACTACC CCTGGCGCCA CGGCGGTACC GGCGAGCTGG AGAGCAAAAG CTCGTTCATC
CGCCTCTTCG AGCCCTGGGG CTGGTATGTC GGAAGCGGCA TCTACATCGC CGATATCGAC
GAGATGTTCG TCAAGCGCCT GATCCAGTCG CTGGTCGGCC TGCTGCTGGC CGGCGCCGCG
CTGTCGCTGG CGATGGGCTG GGTCATCCGC GATCTCATGC GCAATCTCGG CGGCGATCCG
CGCTACGCGG TCGAGGTCGT GGGCCACATC GCCGACGGCG ATCTGACCCA CGCCCCCGTG
CTGCGTCCCG GCGACAGCGA CAGCGTGCTG GCCCACACCA ACCGCATGCG CGAAGCCCTC
GCCGGCGTCA TCGGCGACAT AGGCGGCAGC GCCCGCCAGG TCGAGGCCGA GGCCGAAGCG
ATCGGCGCCG GCAACGCCGA ACTGGCCGCA CGCACCGAGC AGCAGGCGGC GGCCCTGGCC
GAAACCGCTT CGACCATGGA GCAACTGACC GCCACCGTGC GGCAGAACGC CGAGAACGCC
GGCCGGGCCA GCGCCCTGGC GGAGAACTGC GCGGCGAGCG CGCACAAGGG CGGCGGGGCC
ATGCAGTCGG TGGTCGACAT CATGGCCGCC ATCCAGGTCA GCGCCGAGCG GATGTCGGGC
ATCGTCGACA CCATCGATTC GATCGCTTTC CAGACCAACA TCCTGGCGCT GAACGCCTCG
GTGGAGGCGG CGCGCGCCGG CGAGCAGGGC CGCGGCTTCG CGGTGGTGGC CGGCGAGGTG
CGCAATCTGG CCAGCCGCAG CGCCGAGGCG GCCCGCGAGA TCAAGGGCCT GATCGACGGC
GCCGGTGGCC AGGTGCAGGC GGGCAACCAG CAGGTGCGCC GGACCGGCGA GCTCATCCAG
GCCATGGTCG CCGACATCGG CCAGCTCAAC AGGCTGATCG GCGAGATTTC CTCGGCCTCC
GCCGAACAGA GCAGCGGCAT CGAGCAGGTC AACCTGGCCG TGGCGCAGAT GGACCAGATG
ACCCAGCGCA ACGCCGGCAT GGTCCAGGAC AGCGCCCAGG CGACGCAGCG TCTGGCCCGC
CAGAGCGTTC AGCTCAACCG GCATGTGGTG CGCTTCGTCA TCGAGGCCTC CCAGGGCGAT
CCGCGGGGGC GGAAACGCTC CGCCGGCGAA CATCACCAAC AGGACAGGGC GAAGGCCGAA
ACGGCTTGGA GCTGA
 
Protein sequence
MGSPTTSQKL WGTLVAAWLA MLVLVILAAW IMRGMMFEER RAKVESQVEI ALSALGDVVA 
QVERGAMSRE EGQARAAELV KSMRYDDGRG YFFVFDADMR NIAHPTIEAG ARLSEFKDAG
GRNLFVGFAN AVDQGRGRAY FDYPWRHGGT GELESKSSFI RLFEPWGWYV GSGIYIADID
EMFVKRLIQS LVGLLLAGAA LSLAMGWVIR DLMRNLGGDP RYAVEVVGHI ADGDLTHAPV
LRPGDSDSVL AHTNRMREAL AGVIGDIGGS ARQVEAEAEA IGAGNAELAA RTEQQAAALA
ETASTMEQLT ATVRQNAENA GRASALAENC AASAHKGGGA MQSVVDIMAA IQVSAERMSG
IVDTIDSIAF QTNILALNAS VEAARAGEQG RGFAVVAGEV RNLASRSAEA AREIKGLIDG
AGGQVQAGNQ QVRRTGELIQ AMVADIGQLN RLIGEISSAS AEQSSGIEQV NLAVAQMDQM
TQRNAGMVQD SAQATQRLAR QSVQLNRHVV RFVIEASQGD PRGRKRSAGE HHQQDRAKAE
TAWS