Gene Avin_24100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_24100 
SymbolflgL 
ID7761325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2406911 
End bp2408116 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content67% 
IMG OID643805295 
Productflagellar hook-associated protein FlgL 
Protein accessionYP_002799572 
Protein GI226944499 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID[TIGR02550] flagellar hook-associated protein 3 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.184718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTATCA GCACCGTCAC CATGTTCGAA CAGGGTCTGA GTTCGCTGGT CCGCCAGCAG 
AGCGAGTACC TGAAGGTCGG CCAGCAGATC GCCAGCGGCA AGCGGGTGGT CAATCCCTCC
GACGATCCCC AGGCCGCCTC GCGGGCGATC AGCGTGTCCC AGTCCCAGGC CGTCAACCAG
CAATACGACG ACGCGCGGGT CAGCACCCGT AACGCCCTGT CCCAGGAAGA GAGCGTGTTG
AACAGCATCG CCGACGCCAT CGCTAGCGCC AAGACCCGCT TGGTCCAGGC CGGCAACGGC
ACCCTCAGCG ACGCCGACCG CTCCTCCCTG GCCAGCGAGA TCAAGGGCAT CTACGAGTCC
CTGCTCGGCC AGGCCAATGC CACCGACGGC AGCGGTCGCT ACCTGTTCGG CGGCTATCAG
GACAGCAGCC CGCCCTTCGT CAAGGACAAC ACCAGCGGCG CGGTCGCCTA TCAGGGCGAC
GAGGGCTTGA TACTCCAGCA GGTCGATGCC TCGCGGCAGA TGCCGAGCAG CGACAACGGC
AAGCAGATCT TCCAGAGCGT GCACGGCTCC GCCGGCTATC TGGCCCAGGC CGACGCCGGC
AACGCCGGCA CCGTCACCTT CACCGGCCCC TACGTCAGCG ACTCCACGGC CGCCGGTTTC
GGCAGCGGCT TCACCCTGGA CTTCGCGGTG GCCACCGACG GCAGCGTCAC CTATAGCAGC
GACGGCGGCA CCACCCAGGT GCCCTACGCG GACGGGCAGA GCATCGAGAT CAACGGCCTG
AGCCTGACCC TGGAAGGCAC CCCGGCCGAC GGCGATTCGA TCGTCGTGGA GAAGGCCCAG
AACGCCGACC CCGACCTGTT CCGCACTCTC GAGAACATGA TCGCCGCCCT CGATACGCCG
GTCGAGACCG ACGCCGACCT GGCGCGCCTG CAGAACACCC TGTCCACCTC CAGCCGCGAA
CTGGACAACG CGCTGGACAG CGTGCTGACC GTGCGCGCCT CGGTGGGCGC GCGGCTCAAC
GAACTGGACG TGCTCGACGC GGTGGGCGAC AACCGCGCCC TGAACTACAA GCAGACCCTC
TCCGACCTGA TCGACCTCGA CTACAACGAG GCCATTTCCG AATACAGCCT GCGCCAGGTC
GGCCTGCAGG CGGCGCAGAA GGCTTTCGTC GACATCAGTT CGCTGTCGCT GTTCGACCTG
CTCTGA
 
Protein sequence
MRISTVTMFE QGLSSLVRQQ SEYLKVGQQI ASGKRVVNPS DDPQAASRAI SVSQSQAVNQ 
QYDDARVSTR NALSQEESVL NSIADAIASA KTRLVQAGNG TLSDADRSSL ASEIKGIYES
LLGQANATDG SGRYLFGGYQ DSSPPFVKDN TSGAVAYQGD EGLILQQVDA SRQMPSSDNG
KQIFQSVHGS AGYLAQADAG NAGTVTFTGP YVSDSTAAGF GSGFTLDFAV ATDGSVTYSS
DGGTTQVPYA DGQSIEINGL SLTLEGTPAD GDSIVVEKAQ NADPDLFRTL ENMIAALDTP
VETDADLARL QNTLSTSSRE LDNALDSVLT VRASVGARLN ELDVLDAVGD NRALNYKQTL
SDLIDLDYNE AISEYSLRQV GLQAAQKAFV DISSLSLFDL L