Gene Avin_24090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_24090 
SymbolflgK 
ID7761324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2405266 
End bp2406891 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content66% 
IMG OID643805294 
Productflagellar hook-associated protein 
Protein accessionYP_002799571 
Protein GI226944498 
COG category[N] Cell motility 
COG ID[COG1256] Flagellar hook-associated protein 
TIGRFAM ID[TIGR02492] flagellar hook-associated protein FlgK 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.160366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATTT TCTCCATCGG CGTCAGCGGC CTGAATGCCG CCCAGGTGGC CTTGAGCACC 
ACCTCCAACA ACATCACCAA CGTCTACACG GACGGCTACA ACCGCCAGGT CACCCTGCTC
GGCGAGAACA ACCTGGGCAA CGGCGTGCAG AGCAACGGCG TGCAGCGCCA GTTCAGCCTG
TTCGTCGCCA CCCAGCTCAA CCAGTCGACC AGCAATTCCA GCGCGCTGCA GGCCTACGAG
ACGCAGATCA CCCAGATCGA CAATCTGCTG GCGGACAGCG AGGCGGGCCT GTCCCCCTTG
CTGCAAAGCT TCTTCTCCTC CCTGCAGGAC CTGGCCTCGG CGCCTTCCGA TCCGGCCGCC
CGCCAGGGGC TGATCGGCAC CGCCGATACC CTGACCGCGC AGTTCCGCGC TTTCGACGAT
TACCTGAACG ACATGCAGCA GGGCGTCAAC GGGCAGATCG AGGACGTGGT CTTCCAGATT
AACAACACCG CCGAGCAGAT CGCCATGCTC AACCGCGAGA TCGGCCTGGC CAAGGCCAAG
ACCGGCACGG TGCCCAACAG TCTGCTGGAT CAGCGCGACC AACTGGTCGC CGAACTGAGC
GGCATGGTCG ATGTGGATCT GACCATCCAG GACGGCGGCA GCTACAACAT CAGCATCGGC
AACGGCCAGG CCCTGGTCTC CGGTACCAAG AGCTTCGCCC TGGAGGCCAT GGCCTCGTCG
GCGGACCCGA CGCGCACCGT GGTCGGCTAC CGCGACGGCG CCGGCAACCT GCGCGAATTC
TCCGAAACCG CCTTCGAGGG CGGCGAACTG GGCGGACTGA TGACCTTCCG CCGGGAGACT
CTGGACAAGA CCCAGAACCA GCTCGGCCAG CTCGCCGTGT CCCTGGCGCA AGGCTTCAAT
GCGCAGCACA TGGCCGGCGT CGACTACGAG GGCAACCCCG GACAGGCATT CTTCGCCACC
ACCCAGCCGA CCGTCTACAG CAACGCCAAC AACACCAGCA ACGCCTACCT GGAGGCGGAG
TTCCTCGCCG ACGTCAGCGG CCTGACCGCC AGCGACTACA CGGTGAAGTA CACCGCCGCC
GACGGCTATA TGGTGACCCG CAACGACACC GGGGAAGTCG TTGAAACCTT CGCGGCCGGC
GCCAGCAGCC TGGAGTTCGG CGGCATGAGC GTGACGGTCA ACGGCACCCC GGCCGAGGGC
GACCGCTTCC TCGTCCAGCC GACCAAGCGC GCCGCCGGCG GGCTCGAAAA CCTGATCCAG
GATACCTCGC TGATCGCCGC CGGCCAGGAC GACGGCAGCG GCACCGGCAG CGGCGACAAC
CGCAACGCCC TGGCCCTGCA GAACCTGCAG AACAGCGCGC TGGTCGGCGG TGTCGCCACG
CTGAGCCAGG CCTACGCCTC GATCGTCGGC GACGTCGGCA ATCGGGCCAA CGTGGTGCAG
GTCAACCTGG CCGCGCAGCA GGGACTCACC GAGCAACTGC GCGCCCTGCA GCAGTCGGAG
TCCGGGGTCA ACCTGGACGA GGAGGCGGCC AACCTGATCC GTTTTCAGCA GTATTACCAG
GCCAGCGCCA AAATCATCGA GGTGGGGGCG ACCGTGCTCG ACACCCTGCT CGGCCTCGAT
GCCTGA
 
Protein sequence
MSIFSIGVSG LNAAQVALST TSNNITNVYT DGYNRQVTLL GENNLGNGVQ SNGVQRQFSL 
FVATQLNQST SNSSALQAYE TQITQIDNLL ADSEAGLSPL LQSFFSSLQD LASAPSDPAA
RQGLIGTADT LTAQFRAFDD YLNDMQQGVN GQIEDVVFQI NNTAEQIAML NREIGLAKAK
TGTVPNSLLD QRDQLVAELS GMVDVDLTIQ DGGSYNISIG NGQALVSGTK SFALEAMASS
ADPTRTVVGY RDGAGNLREF SETAFEGGEL GGLMTFRRET LDKTQNQLGQ LAVSLAQGFN
AQHMAGVDYE GNPGQAFFAT TQPTVYSNAN NTSNAYLEAE FLADVSGLTA SDYTVKYTAA
DGYMVTRNDT GEVVETFAAG ASSLEFGGMS VTVNGTPAEG DRFLVQPTKR AAGGLENLIQ
DTSLIAAGQD DGSGTGSGDN RNALALQNLQ NSALVGGVAT LSQAYASIVG DVGNRANVVQ
VNLAAQQGLT EQLRALQQSE SGVNLDEEAA NLIRFQQYYQ ASAKIIEVGA TVLDTLLGLD
A