Gene Avin_23660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_23660 
SymbolphbR 
ID7761282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2371675 
End bp2372721 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content53% 
IMG OID643805251 
ProductTranscription activator in PHB biosynthesis, AraC family 
Protein accessionYP_002799529 
Protein GI226944456 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00474506 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTACAG TCAGTGTGAA TTATGCACGG CTCGTCGAGG AGACGCTTAG GGCAGAGGGT 
TTGGAAATTG AAAGTCTACT TAAGGAGTTG GGCTTAAACC CTAATATTTT CAATGATATA
GAAGGATGTC GTGTCAAGAA TCTTTCGAGG ATCCTGAGTC GAGCCGTGGT GCAGAGCGGC
AATCCGGATA TAGGGCTCAA GGCCTATGGG CTGGTCAAGC CCGGGATTTA CGATGTCGTG
GGCTATGCGA TGATGTCGAG CCCCGATCTC AAAAGTGCTC TTCAGCATTT TGTCCGTTAT
TGCTCATTGA TCGATAATGG CGTCGATTTT TCCCTGCATC GGGAGGGGCG CACCTATCGT
CTGTGTGGCC GCCGCCATGG CGGTAGCAAG GCCATACCAC GGCAGTTCTA CGATGTCGGT
ATGGCGGCGT TGATTGCCTA CCTGCGTTGG TTATGCGGGA ACGCACGGTT CACGCCTTTG
TGTATCGAGT TCGTGCATGC GGAGCCGATT GATACGGAAG AATATGCTCG CATCCTGAAC
TGTCCTATCC GATTCAATTC TTCTCATTTT TCCATTTTTT TCGATGCGAC CCAACTGGAC
TCTCCTTTGA GCACCGCCGA TGCGGCCTTG GCAAGCATGC ACGAGCGTTT TGCCGAGCAG
CGACTGCATG AGCAGAACTC CCAATTGAGT ACTTGGCGAG TCCAGCAGTT GATCATGGAG
CGGCTGAGCG ACGGCGAGCC AACCATAGAA GAGATAGCGG GAACACTTTG CGTGAGCAAA
CGCACCTTGC AGCGTTGTCT GAAGAAGGAG GGTACCCAAT ACAAGGATTT GCTGAATGAA
ACTCGTCGTG AGCAGGCTCA TCTGTATCTG TGCCATTCAC ATTTCAGCCT GCAGGAGGTC
GCCTACCTGC TGGGGTTTCA CGAGCACAGC AGTTTTTTCC GTGCCTGTTC GCGTTGGTTC
GGTATGACTC CGGGGCAATA CCGGGCTCAT AGAAGTTTTT TCCGAGCCGA CTCCCGGAAG
GGGCATGCCG TTGTCGCATA CGGATGA
 
Protein sequence
MFTVSVNYAR LVEETLRAEG LEIESLLKEL GLNPNIFNDI EGCRVKNLSR ILSRAVVQSG 
NPDIGLKAYG LVKPGIYDVV GYAMMSSPDL KSALQHFVRY CSLIDNGVDF SLHREGRTYR
LCGRRHGGSK AIPRQFYDVG MAALIAYLRW LCGNARFTPL CIEFVHAEPI DTEEYARILN
CPIRFNSSHF SIFFDATQLD SPLSTADAAL ASMHERFAEQ RLHEQNSQLS TWRVQQLIME
RLSDGEPTIE EIAGTLCVSK RTLQRCLKKE GTQYKDLLNE TRREQAHLYL CHSHFSLQEV
AYLLGFHEHS SFFRACSRWF GMTPGQYRAH RSFFRADSRK GHAVVAYG