Gene Avin_23620 details

Gene Information

• Locus tag: Avin_23620
• Symbol: ppiD
• ID: 7761278
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 2365188
• End bp: 2367062
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 643805247
• Product: PpiC-type peptidyl-prolyl cis-trans isomerase
• Protein accession: YP_002799525
• Protein GI: 226944452
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0760] Parvulin-like peptidyl-prolyl isomerase
• TIGRFAM ID: [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGCAGA ACATCAGGGA CAATTCACAA GGGTGGATTG CCAAGATCAT CATTGGGGTT 
ATCATCGTAC TGTTGGCCTT GACCGGCTTC GACGCCATTC TCACTAGCAC GAGCAACAGC 
CAGAATGCGG CAGAGGTCAA TGGCGCGAAA ATCGGACTGG CCGAGCTGAA CAGGGAAGTG 
GAGACGCAGC GTCGGCAACT GCTCCAGCAG CTTGGCAAGG ACTTCGATGC TTCTCAATTG 
AACGAGGGGT TGCTACGCAA TGCAGCGCTC AGCGGCCTGA TAGAGCGCAA GTTGCTGCTG 
CAGGGAGCGG AAGCGGCAGA TTTTGCTTTT TCCCAAAATG CTCTGGATCA GCTGATTCTG 
CAGACTCCTG AATTTCAGGT CGATGGCAGA TTCGACGCCA ATAGGTTCGA TCAAGTCATT 
GCGCAGATGG GCTACAGTCG TCCGCAGTTT CGACAGATGT TGGAGCAGGA AATGCTCATC 
GGTCAGTTGC GCGCCGGTTT GGCTGGTAGT GGCTTTGCGA CTGATCGCGA GATCGGCGAC 
TTTGTTCGCT TGGAGCGGCA GACTCGAGAT TTTTACACCT TGACATTATC CGCTGACCCT 
GCCCAGGTGA CGGTCGGGGA CGAGGTGGTG CAGGCCTACT ACGAGGAACA TGCCAGTAGC 
TATATGACTT CCGAGCAGCT CGTAGTGGAA TATATCGAGC TGAAGCGGGA TGCCTTCTTC 
GACCAGGTAG AAATCAGGGA CGAGGATCTA CAGGCACTTT ATCAGCGAGA AATTGCCAAT 
CTTGCTGAAC AGCGACAGGC TGCACATATT CTCCTCGAAG TGAACGACAA GCTGAGTGAG 
GAGCAGGCTA AGGCCAAGCT GGAGGAGCTC AAGGCGCGTA TCGACAAGGG GGAAGATTTT 
GCCGCTCTGG CCAAGGAGTT CTCTCAGGAT CCGGGCTCGG CAGACAAAGG GGGTGATCTA 
GGCTATGCAG GGCCTGATGT CTATGATCCG GCTTTTGAGA AGGTGCTTTA TTCCTTGAAG 
GAGGGAGAGG TCAGTTCTCC GGTTCGCAGC GAGTTCGGCT GGCACTTGAT CAAGCTGCTC 
GATGTGCAAG CGCCCGAGAT TCCCAGCTTC GATACCCTGA AGGAAAAATT GGTCCATGAA 
CTCAAGGCAG AGCAAGTCGA GCAGGCTTTT GTTGAGGCTT CGCGTGACTT GGAGAATGCA 
GCCTTCGAGG CATCGGATCT TGCTCAGCCG GCCCAGGAGC TTGGGCTTCA GATTAAAGTC 
ACTCCTCCTT TTGGTCGTGA AGGCGGTGAA GGCTTAACAG CGAACCGGCA GGTCGTTCAG 
ATTGCATTCA GTCCCGAAGT GCTTGAGCAA GGCAATAATA GTAGTGCTAT CGAGTTGGAT 
CCCGATACAG TCGTTGTTCT GAGGGTGAAA GAACATAAGA AGCCCGAGCA AATTCCCTTT 
GATCAGGTAG CTGGCAAAAT TCGAGAGCAG TTGCTGAAGA AGCATGCTGC CGAAGAGGTC 
AGAGTCAGAG GAGAGGCTCT CCTCGGTGAG CTTCGGCAGG GACACACACC GATTGATCAA 
GCTCAACAGG GGGAGGGTTG GCATGTGGTG GAAGCTGCGG CACGTGATCA AGAAGGTGTT 
GATCCTGCCA TCCTGCAGTC GGCATTCCAC ATGCCGAAGC CTGCTGGCAC AGATAAGCCC 
TCCTTTGCCG GAGTTGAGCT ACCGAACGGT GATTATGCAC TGATTCGCCT GACTGGAGTC 
AGCGATCCTT CGGATGCTTT GTCCGAAGAG GAGAAAGGCA TGTATCGACG CTTTTTGGCC 
TCACGTAATG GCCAACAGGA TTTTGCAGCC TATCGGCGCC AGCTTCAGTC GGTAGCTGAC 
ATCGAGCGTT TCTGA 

 

Protein sequence

MLQNIRDNSQ GWIAKIIIGV IIVLLALTGF DAILTSTSNS QNAAEVNGAK IGLAELNREV 
ETQRRQLLQQ LGKDFDASQL NEGLLRNAAL SGLIERKLLL QGAEAADFAF SQNALDQLIL 
QTPEFQVDGR FDANRFDQVI AQMGYSRPQF RQMLEQEMLI GQLRAGLAGS GFATDREIGD 
FVRLERQTRD FYTLTLSADP AQVTVGDEVV QAYYEEHASS YMTSEQLVVE YIELKRDAFF 
DQVEIRDEDL QALYQREIAN LAEQRQAAHI LLEVNDKLSE EQAKAKLEEL KARIDKGEDF 
AALAKEFSQD PGSADKGGDL GYAGPDVYDP AFEKVLYSLK EGEVSSPVRS EFGWHLIKLL 
DVQAPEIPSF DTLKEKLVHE LKAEQVEQAF VEASRDLENA AFEASDLAQP AQELGLQIKV 
TPPFGREGGE GLTANRQVVQ IAFSPEVLEQ GNNSSAIELD PDTVVVLRVK EHKKPEQIPF 
DQVAGKIREQ LLKKHAAEEV RVRGEALLGE LRQGHTPIDQ AQQGEGWHVV EAAARDQEGV 
DPAILQSAFH MPKPAGTDKP SFAGVELPNG DYALIRLTGV SDPSDALSEE EKGMYRRFLA 
SRNGQQDFAA YRRQLQSVAD IERF