Gene Avin_23390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_23390 
SymbolnarK 
ID7761255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2338494 
End bp2339705 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content68% 
IMG OID643805221 
ProductNitrate/nitrite transporter 
Protein accessionYP_002799502 
Protein GI226944429 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2223] Nitrate/nitrite transporter 
TIGRFAM ID[TIGR00886] nitrite extrusion protein (nitrite facilitator) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACGA GTTTCTGGAA GGCTGGCCAT ACCCCCACGC TGTTCGCCGC ATTCCTCTAT 
TTCGACCTGA GCTTCATGGT CTGGTACGTG CTCGGCCCGT TGGGCGTGCA GATCGCCACC
GACCTAGGGC TGAGCACTCA ACAACGCGCC CTGATGGTCG CCACGCCGAT CCTCTCCGGC
GCCGTGCTGC GCTTCGTCAT GGGCATGCTG GCCGACCGCA CTTCGCCGAA GAGCGCCGGC
ATCCTCGGCC AGGCGATCGT CATCGCCGCC CTGGGGCTGG CCTGGAGCAT GGGCATCCAC
AACTACGAAC AGGCGTTGCT GCTCGGCCTG TTCCTCGGCT TCGCCGGCGC CTCCTTCGCC
GTGGCCCTGC CGCTGGCCTC GCAGTGGTAT CCGCCGCAGC ACCAGGGCAA AGCCATGGGC
ATCGCCGGCG CCGGCAACTC CGGCACCGTG CTCGCCGCGC TCTTCGCTCC CGGTCTGGCC
GGCGCATTCG GCTGGAACAA TGTGTTCGGC CTGGCGCTGA TCCCGCTGGT GCTGACCCTG
GTCATCTTCG CCGGTGTCGC CAGGAACGCT CCGGAGCGCC CGCAACCAAA GGCCGTAGCC
GACTACCTGA AAGCCCTGGC CGACCGCGAC AGCTGGTGGT TCATGCTGTT CTACAGCGTG
ACTTTCGGCG GCTTCCTCGG CCTGGCCAGC ACCCTGCCCG GCTACTTCCA CGACCAGTAC
GGCTTCGATC CGGTGAAAGC CGGCTACTAC ACCGCCGCCT GCGTGTTCGC CGGCAGCCTG
CTGCGTCCGC TCGGCGGCGC CCTGGCCGAC CGCATCGGCG GGATTCGCAC CCTGCTGGTG
ATGTATACCC TGGCCGCCCT GTGCATCGCC GTGGTCGGCT TCAACCTGTC CAGCTCCAGC
GCCGCGCTGG CCCTGTTCGT GGTCGCCATG CTCAGCCTGG GCGCCGGCAA CGGCGCGGTG
TTCCAACTGG TGCCACAGCG TTTTCGCAAG GAGATCGGCG TGATGACCGG CCTGATCGGC
ATGGCCGGCG GTATCGGCGG TTTCGCCCTG ACCGCGGGAC TCGGCGCCAT CAAGCAGTCC
ACCGGCGACT ACCAGATCGG CCTGTGGCTG TTCGCCGCTC TCGGCGTGAT CGCCTGGATC
GGCCTGCACG GCGTGAAGAA GCGCTGGCGC ACCACCTGGG GTAGCGCCGC GGTGACGGCG
GCACGGGTCT GA
 
Protein sequence
MNTSFWKAGH TPTLFAAFLY FDLSFMVWYV LGPLGVQIAT DLGLSTQQRA LMVATPILSG 
AVLRFVMGML ADRTSPKSAG ILGQAIVIAA LGLAWSMGIH NYEQALLLGL FLGFAGASFA
VALPLASQWY PPQHQGKAMG IAGAGNSGTV LAALFAPGLA GAFGWNNVFG LALIPLVLTL
VIFAGVARNA PERPQPKAVA DYLKALADRD SWWFMLFYSV TFGGFLGLAS TLPGYFHDQY
GFDPVKAGYY TAACVFAGSL LRPLGGALAD RIGGIRTLLV MYTLAALCIA VVGFNLSSSS
AALALFVVAM LSLGAGNGAV FQLVPQRFRK EIGVMTGLIG MAGGIGGFAL TAGLGAIKQS
TGDYQIGLWL FAALGVIAWI GLHGVKKRWR TTWGSAAVTA ARV