Gene Avin_23200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_23200 
SymbolgntR 
ID7761236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2315350 
End bp2316072 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content62% 
IMG OID643805202 
Producttranscriptional regulator, GntR 
Protein accessionYP_002799483 
Protein GI226944410 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGAGA CACCATCCTC GCTGCTGGCT ATTCCAGACG ATTCCGAAAC GCTCTCCGAG 
CATGTGTTCC GACGCATCCA GGCGGCGATC GTGAAGGGTG AGATCGCCCC GGGCAGCAAG
ATTTCCGAGC CCGAACTGGC GCGTGTCTAC GGCATCAGCC GCGGTCCTCT GCGTGAAGCC
ATCCATCGCC TGGAAGGGCA GAAACTGCTG GTCCGGGTTC CCCATGTGGG AGCCAGGGTG
GTTTCGCTCA GCCACCAGGA ACTGATCGAG CTTTACGAGA TCCGCGAGTC GCTCGAAGGC
ATGGCCTGCC GCCTGGCGGC CGAGCGCATG ACGCAGGCGG GCGTCGACGA ATTGCGTCGG
GTACTGGATA CCCACGAGCG CGACGAAGCC TTCCAGGCCG GTGTCGGCTA TTACCAGCAG
GAAGGCGATT TCGACTTCCA TTACCGGATC ATCCAGGGCA GCGGCAACCA GACGCTGGTG
CGCATGCTCT GCGGGGAGAT GTATCAACTG GTGCGCATGT ACCGCATCCA GTTCTCCTCC
ACGCCCAACC GGCCGCGCCA GGCCTTCAAC GAACACCACC GGATACTCGA TGCCATCGCC
GACCGTGACG GCGAACTGGC CGAACTGCTG ATGCGCCGGC ACATAGCCGC TTCCCGGCGC
AACATGGAGC GCCACTACGA AGGCGCTCAG GTCACTACAG CCAACAAGAG AGGTAAGTCA
TGA
 
Protein sequence
MLETPSSLLA IPDDSETLSE HVFRRIQAAI VKGEIAPGSK ISEPELARVY GISRGPLREA 
IHRLEGQKLL VRVPHVGARV VSLSHQELIE LYEIRESLEG MACRLAAERM TQAGVDELRR
VLDTHERDEA FQAGVGYYQQ EGDFDFHYRI IQGSGNQTLV RMLCGEMYQL VRMYRIQFSS
TPNRPRQAFN EHHRILDAIA DRDGELAELL MRRHIAASRR NMERHYEGAQ VTTANKRGKS