Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_23200 |
Symbol | gntR |
ID | 7761236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 2315350 |
End bp | 2316072 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643805202 |
Product | transcriptional regulator, GntR |
Protein accession | YP_002799483 |
Protein GI | 226944410 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGAGA CACCATCCTC GCTGCTGGCT ATTCCAGACG ATTCCGAAAC GCTCTCCGAG CATGTGTTCC GACGCATCCA GGCGGCGATC GTGAAGGGTG AGATCGCCCC GGGCAGCAAG ATTTCCGAGC CCGAACTGGC GCGTGTCTAC GGCATCAGCC GCGGTCCTCT GCGTGAAGCC ATCCATCGCC TGGAAGGGCA GAAACTGCTG GTCCGGGTTC CCCATGTGGG AGCCAGGGTG GTTTCGCTCA GCCACCAGGA ACTGATCGAG CTTTACGAGA TCCGCGAGTC GCTCGAAGGC ATGGCCTGCC GCCTGGCGGC CGAGCGCATG ACGCAGGCGG GCGTCGACGA ATTGCGTCGG GTACTGGATA CCCACGAGCG CGACGAAGCC TTCCAGGCCG GTGTCGGCTA TTACCAGCAG GAAGGCGATT TCGACTTCCA TTACCGGATC ATCCAGGGCA GCGGCAACCA GACGCTGGTG CGCATGCTCT GCGGGGAGAT GTATCAACTG GTGCGCATGT ACCGCATCCA GTTCTCCTCC ACGCCCAACC GGCCGCGCCA GGCCTTCAAC GAACACCACC GGATACTCGA TGCCATCGCC GACCGTGACG GCGAACTGGC CGAACTGCTG ATGCGCCGGC ACATAGCCGC TTCCCGGCGC AACATGGAGC GCCACTACGA AGGCGCTCAG GTCACTACAG CCAACAAGAG AGGTAAGTCA TGA
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Protein sequence | MLETPSSLLA IPDDSETLSE HVFRRIQAAI VKGEIAPGSK ISEPELARVY GISRGPLREA IHRLEGQKLL VRVPHVGARV VSLSHQELIE LYEIRESLEG MACRLAAERM TQAGVDELRR VLDTHERDEA FQAGVGYYQQ EGDFDFHYRI IQGSGNQTLV RMLCGEMYQL VRMYRIQFSS TPNRPRQAFN EHHRILDAIA DRDGELAELL MRRHIAASRR NMERHYEGAQ VTTANKRGKS
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