| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_22280 |
|---|
| Symbol | xdhB |
|---|
| ID | 7761146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 2226674 |
|---|
| End bp | 2229067 |
|---|
| Gene Length | 2394 bp |
|---|
| Protein Length | 797 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643805113 |
|---|
| Product | xanthine dehydrogenase, molybdopterin binding subunit |
|---|
| Protein accession | YP_002799394 |
|---|
| Protein GI | 226944321 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG4631] Xanthine dehydrogenase, molybdopterin-binding subunit B |
|---|
| TIGRFAM ID | [TIGR02965] xanthine dehydrogenase, molybdopterin binding subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.775322 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAC TCATCTCCCA CAGCCAGGAA GAACTCGCCG CGCTGTTTCG CGCGGAACTG
CTCACCGGCG TCGGCCGCAG CGTCCGGCAC GAGAGCGCGG CCAAGCACGC GAGCGGCGCG
GCGCTCTACA TCGACGACCG CCTGGAATTC CCCAACCAGT TGCACGTCTA CGCGCGCCTC
TCCGAGCGCG CCCACGCACG CATCGTCCGC ATCGACAGCA CGCCCTGCTA CGCCGTCCCC
GGCGTGGCCA TCGTCATCAC CAGCGCCGAC GTGCCCGGCA AGCTGGACAT CGGCCCGGTG
TTCCCCGGCG ACCCGCTGCT CGCCGACGGC AGCGTGCAAT ACCTCGGCCA GCCGGTGCTG
GCGGTGGCCG CCGACAGCCT GGAGAACGCC CGCCGCGCGG CGCTGGCGGC GCTGATCGAG
TACGAGGACC TGGAGCCGGT GCTGACGGTG GACGAGGCCC TGCGCCGCCG GCAGTTCGTC
CTCGACAGCC ACAGCCACCG GCGCGGCGAT GCCGCCGCGG CGCTGGCCGA GGCCCCCCAT
CGCCTCGCCG GCAGCCTGCG GATCGGCGGC CAGGAGCACT TCTACCTGGA AACGCAGATC
GCTTCGGTGC TGCCCACCGA GGACGGCGGC ATGCTGGTCC ACAGCTCGAC CCAGCACCCC
AGCGAGGTGC AGAAACTGGT CGCCGAGGTG CTCGGCGTGC CGCTGAACAA GGTGGAAGTG
GACATGCGCC GCATGGGTGG CGGCTTCGGC GGCAAGGAAA CCCAGGCCGC GGCGCCGGCC
TGCCTGTGCG CGGTGATCGC CCGCCTGACC GGACGGCCGA CCAAGATGCG CCTGCCGCGC
AACGAGGACA TGCGCATCAC CGGCAAGCGC CATCCCTTCC AGGTGGAGTA CGAGGTCGGC
TTCGACGACG ACGGCCGCCT GCACGGCGTG CACATCCAGT TGGCGGCCAA CTGCGGTTAT
TCGCCGGATC TTTCCGGGGC CATCGTCGAC CGCGCCATGT TCCATGCCGA CAACGCCTAC
TACCTGGGCG ATGCCCTGGT GGAAGGTCAC CGCTGCAAGA CCAACCTCGC CTCCAACACC
GCCTTTCGCG GCTTCGGCGG CCCGCAGGGG ATGCTCGCCA TCGAGGAGAT CATGGACGCC
ATCGCCCGCC ACCTCGGCAA GGACCCGCTC GCGGTGCGCA AGCTCAACTA CTACGGCAAG
ACCGAGCGCA ACCTCACCCA CTACCACCAG ACGGTGGAAC ACAACCTGCT CGAAGAGATG
ACCGCCGAGC TGGAGGCAAG CTGCGACTAT GCCGCGCGCC GCGAGGAAAT CCGCGCCTTC
AACGCCCGGA GCCCGGTGCT GAAGAAGGGT CTGGCGCTGA CCCCGGTGAA GTTCGGCATC
AGCTTCACGT CGAGCTTTCT CAACCAGGCC GGCGCGCTGG TGCACGTCTA CACCGACGGC
AGCATCCACC TCAACCACGG CGGCACCGAG ATGGGCCAGG GCCTCAACAC CAAGGTCGCC
CAGGTGGTCG CCGAGGTGTT CCAGGTGGAT GTCTCGCGCA TCCAGATCAG CCCGGCGAAC
ACCGGCAAGG TGCCCAACAC CTCGCCCACC GCCGCCTCCA GCGGCGCCGA CCTGAACGGC
AAGGCGGCCA AGGAAGCCGC GCAGACCATC AGGCAGCGCC TGGTCGACTT CGCCGCCCGG
CACTGGCAGG TCGGCGCGGA GGACGTGCAG TTCAAGAACG GCCAGGTGCG CATCCGCGAC
CGCTACCTGA GCTTCGAGGA ACTGGTCCAG GCGGCCTACC TCGGCCAGGT GTCGCTCTCC
AGCACCGGCT TCTACCGCAC GCCGAAGATC TACTACGACC GCACCCAGGC GCGCGGCCGG
CCGTTCTACT ACTACGCCTT CGGCATGGCC TGCGCGGAAG TGCTGGTCGA CACCCTGACC
GGCGAGTACC GGCTGCTGCG CGCCGACATC CTCCACGACG TCGGCGCCTC GCTGAACCCG
GCCATCGACA TCGGCCAGGT GGAAGGCGGC TTCGTCCAGG GCATGGGCTG GCTGACCTGC
GAGGAACTGG TGTGGGACGA CAAGGGCCGC CTGCTCACCG CCGGGCCCGC CAGCTACAAG
ATCCCCACGG TCGCCGACGT GCCGGCCGAC CTGCGGGTGA AACTGCTGGA AAACCGCCGC
AACCCGGAGG ACACGGTGTT CCATTCCAAG GCCGTCGGCG AGCCGCCGTT CATGCTCGGC
ATCTCGGTGT GGTGCGCGAT CAAGGACGCC GTGGCCAGCC TCGCCGACTA CCACCTGCAG
CCGGCCATCG ACGCCCCGGC GACGCCGGAG CGGGTGCTCT GGGGCGTGGA GCAGATGAAA
AAGCTGCAGC AGCCCCAAGG TGCGGTGCAC GAGCACGCGG GCGAATCGAC GTAG
|
|---|
| Protein sequence | MSELISHSQE ELAALFRAEL LTGVGRSVRH ESAAKHASGA ALYIDDRLEF PNQLHVYARL
SERAHARIVR IDSTPCYAVP GVAIVITSAD VPGKLDIGPV FPGDPLLADG SVQYLGQPVL
AVAADSLENA RRAALAALIE YEDLEPVLTV DEALRRRQFV LDSHSHRRGD AAAALAEAPH
RLAGSLRIGG QEHFYLETQI ASVLPTEDGG MLVHSSTQHP SEVQKLVAEV LGVPLNKVEV
DMRRMGGGFG GKETQAAAPA CLCAVIARLT GRPTKMRLPR NEDMRITGKR HPFQVEYEVG
FDDDGRLHGV HIQLAANCGY SPDLSGAIVD RAMFHADNAY YLGDALVEGH RCKTNLASNT
AFRGFGGPQG MLAIEEIMDA IARHLGKDPL AVRKLNYYGK TERNLTHYHQ TVEHNLLEEM
TAELEASCDY AARREEIRAF NARSPVLKKG LALTPVKFGI SFTSSFLNQA GALVHVYTDG
SIHLNHGGTE MGQGLNTKVA QVVAEVFQVD VSRIQISPAN TGKVPNTSPT AASSGADLNG
KAAKEAAQTI RQRLVDFAAR HWQVGAEDVQ FKNGQVRIRD RYLSFEELVQ AAYLGQVSLS
STGFYRTPKI YYDRTQARGR PFYYYAFGMA CAEVLVDTLT GEYRLLRADI LHDVGASLNP
AIDIGQVEGG FVQGMGWLTC EELVWDDKGR LLTAGPASYK IPTVADVPAD LRVKLLENRR
NPEDTVFHSK AVGEPPFMLG ISVWCAIKDA VASLADYHLQ PAIDAPATPE RVLWGVEQMK
KLQQPQGAVH EHAGEST
|
|---|
| |