Gene Avin_22160 details

Gene Information

• Locus tag: Avin_22160
• Symbol: rpiA-1
• ID: 7761134
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 2215359
• End bp: 2216033
• Gene Length: 675 bp
• Protein Length: 224 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643805101
• Product: Ribose 5-phosphate isomerase
• Protein accession: YP_002799382
• Protein GI: 226944309
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0120] Ribose 5-phosphate isomerase
• TIGRFAM ID: [TIGR00021] ribose 5-phosphate isomerase

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTCAGG ATCAGCTTAA GCAGGCCGTG GCTCAGGCCG CCCTCGATCA CATCCTGCCG 
CATCTCACGC GGCAGAGCAT CGTCGGCGTC GGCACCGGCT CCACCGCCAA CTTCTTCATC 
GACCTGCTGG CCCGCCACCG GATGGACTTC GACGGCGCCG TGGCCAGTTC CGAGGCTACT 
GCCGCCCGTC TGAGGAGCCA TGGCATCGAA GTGCACGACC TGAACAGCAT CGCCGAGCTG 
GAGTTCTACG TGGACGGTGC CGACGAGTGC AACGGGCACC TGGAGCTGAC CAAGGGCGGC 
GGTGGCGCGC TGACCCGCGA GAAGATCGTC GCCGCGGTGG CCAAAACCTT CGTCTGCATC 
GCCGACGAGA GCAAGCGCGT CGATTTTCTC GGCGGTTTCC CGCTGCCGGT GGAGGTGATC 
CCCATGGCCC GTGGCCACGT GGCGCGCCAA CTGGTCATGC TGGGCGGTAA CCCGGTCCAT 
CGCGAAGGGG TGGTGACCGA CAACGGCAAC GTGATTCTCG ACGTGTACGA CATGCGGATC 
ATCGACCCCA GGCAATTGGA GTCGGATATC AACGGCATCG TCGGGGTGGT CTGCAACGGT 
CTGTTCGCCG CGCGCCCGGC CGACCTGCTG TTGCTCGGCA CCCATAACGG GGTCGAAAAG 
TTTGGACGTC GGTAA 

 

Protein sequence

MIQDQLKQAV AQAALDHILP HLTRQSIVGV GTGSTANFFI DLLARHRMDF DGAVASSEAT 
AARLRSHGIE VHDLNSIAEL EFYVDGADEC NGHLELTKGG GGALTREKIV AAVAKTFVCI 
ADESKRVDFL GGFPLPVEVI PMARGHVARQ LVMLGGNPVH REGVVTDNGN VILDVYDMRI 
IDPRQLESDI NGIVGVVCNG LFAARPADLL LLGTHNGVEK FGRR