Gene Avin_22120 details

Gene Information

• Locus tag: Avin_22120
• Symbol: rpiB
• ID: 7761130
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 2210637
• End bp: 2211110
• Gene Length: 474 bp
• Protein Length: 157 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 643805097
• Product: Ribose 5-phosphate isomerase B protein
• Protein accession: YP_002799378
• Protein GI: 226944305
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0698] Ribose 5-phosphate isomerase RpiB
• TIGRFAM ID: [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family; [TIGR01120] ribose 5-phosphate isomerase B

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGAGC CATTTTCTGT GGCTATCGGT TGTGATGAGG CAGGCTTTGA GCTTAAAGAG 
TTGCTCAAAC GCCATATTGA GGATCTGGGC TACAGACTTA AGGATTTCGG CTGCTATTCG 
ACCGATCCGG TGCTGTACCC GGATATCGCC ACCGCGGTTG CGACTGCCAT TAGCGCCGGC 
CAGCACCGTC TGGGTGTGCT GATCTGCGGG ACCGGCATAG GCATGGCTAT TTCTGCCAAC 
AAGATTCAGG GCATTCGCGC CGCGCAGGCG CACGACACCT ATTCCGCGGA GCGGGCGCGC 
AAGAGTAACG ATGCGCAGAT CGTTTCCATC GGGGCGCGGG TGATTGGTCC CGAGTTGGCG 
AAAAACATCG TCAAATCCTT CCTCGAGTCG GAGTTCGAGG CCGGCCGTTC GGGGCCGAAA 
GTAGAGCGGA TCAAGGCCGT CGAGAAAGCC GATCGGGAGC AGTCGCCTAA GTAA 

 

Protein sequence

MNEPFSVAIG CDEAGFELKE LLKRHIEDLG YRLKDFGCYS TDPVLYPDIA TAVATAISAG 
QHRLGVLICG TGIGMAISAN KIQGIRAAQA HDTYSAERAR KSNDAQIVSI GARVIGPELA 
KNIVKSFLES EFEAGRSGPK VERIKAVEKA DREQSPK