Gene Avin_22090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_22090 
Symbol 
ID7761127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2207868 
End bp2208794 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content58% 
IMG OID643805094 
Productinner-membrane translocator 
Protein accessionYP_002799375 
Protein GI226944302 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTGCGCCTTG CCCTGGACCG TTTTGGACTG CCGCTGGTAT TCGTCTTGTT GTGCCTCATA 
TTGAGTCTCT CCAGCGAGTA CTTCATGACC TGGCGCAACT GGATGGATAT CCTTCGACAG
ACCTCCATCA ACGGTATTCT CGCCATAGGC ATGACCTATG TTGTCATCAC CCGGGGTATC
GACCTCTCGG TAGGCTCGAT TCTGGCGTTC GCCGGCCTCT GTAGCGCCAT GGTGGCAGCA
CAGGATCATG GCCTGCTGGC TTCGCTCAGC GCGGGCATGT TCGCCGGCGC GGCACTGGGC
GCGGTGAACG GATTCATGGT TGCGAACCTT TCCATTCCTC CCTTTGTCGC CACGCTGGGA
ATGCTCAGTA TCGCTCGCGG CATGACTTTC ATCCTCAACG ATGGCAGCCC GATAACCGAG
TTGCCGGAAA GTTATCTGGC GCTCGGTATC GGCAGCCTGG GTCCGGTGAG CATGCCGATC
GTGATTTTTG CCATAGTCGC CCTGTTCTTC GCCCTGGTAC TCAAGTACAC CACCTACGGC
CGCTATGTAT ATGCCGTGGG CGGCAACGAG AAAAGTGCAC GCACTTCGGG AATCGGAGTG
CGCAAGGTGA TGTTTTCCGT TTATATCGTG TCCGGTGTAC TGGCCGGGCT CGCCGGAATG
GTGCTTACGG CACGCACTAC CGCCGCCCTG CCCCAGGCAG GCATGTCCTA TGAGCTGGAC
GCAATCGCCG CGGTGGTTAT CGGTGGTACC AGCCTGTCCG GCGGCAGCGG CAATATCGTC
GGCACCCTGT TTGGCGCATT GTTGATCGGC GTGATCAATA ACGGTTTGAA CCTCCTGGGA
GTTTCTTCCT ATTACCAGCA GGTTGCCAAA GGCCTGATCA TCGTGATCGC CGTATTGGTT
GACGTTTGGC GTAAAAAGAA ACGCTGA
 
Protein sequence
MRLALDRFGL PLVFVLLCLI LSLSSEYFMT WRNWMDILRQ TSINGILAIG MTYVVITRGI 
DLSVGSILAF AGLCSAMVAA QDHGLLASLS AGMFAGAALG AVNGFMVANL SIPPFVATLG
MLSIARGMTF ILNDGSPITE LPESYLALGI GSLGPVSMPI VIFAIVALFF ALVLKYTTYG
RYVYAVGGNE KSARTSGIGV RKVMFSVYIV SGVLAGLAGM VLTARTTAAL PQAGMSYELD
AIAAVVIGGT SLSGGSGNIV GTLFGALLIG VINNGLNLLG VSSYYQQVAK GLIIVIAVLV
DVWRKKKR