Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_22070 |
Symbol | |
ID | 7761125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 2205964 |
End bp | 2206722 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643805092 |
Product | short chain dehydrogenase |
Protein accession | YP_002799373 |
Protein GI | 226944300 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAAAT ACTTGGATAA GGCGTTCGAT CTGCAGGGAC GCTGCGCCAT CGTCACCGGA GGGGCAGCCG GTATCGGTCT GGCCTGCGCC AGACTGCTCA CCGAATGCGG CGCACGAGTC GCCCTGCTCG ATCGCAACCC GGCAGTGGAA ACCGTTGCCG CCGGCTTGGG CAGCGGACAC CTCGGCGTCG CCCTGGACGT ACGCCAGCTC GATGAGATCC AGGCAGCAGT GGAGCGCGTG GTCGCCGCCT TCGGCCAAAT CGACTATCTG GTCAACAGTG CGGGAGTCGC TCGGCTCGAC AAGGCGCTGG ATGTCGACGA AGAAAGCTGG GATATCACTC TCGATATAAA TCTCAAGGCC AGCTTCTTCG CTGCCCAAGC GGTCGCGCGG CACATGCGCG AGCGTGGCGC CGGACGCATT GTCAATCTCG CATCCCAGGC AGCCGTCATC GGTCTCGATC GCCATGCCGC CTATTGCGCC AGCAAGGCCG CGATAGTCGG CCTGACCAAA GTCTTGGCGA TGGAATGGGC CGAGCATGGC ATCACCGTCA ACGCCGTATC GCCGACCATC GTCGAAACCG AGCTGGGCAA GCAGGCTTGG GCGGGGGAAG TCGGAGAGCG GGCCAAACAG CAGATCCCCG TGGGCCGCTT CGCCCAACCC GAAGAAGTTG CCAGCCTGGT GCTTTATCTA CTCAGCGACG CAGCAGCGAT GATCACTGGT GAAAATGTGG TCATCGATGG CGGCTACACC ATCAAGTAA
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Protein sequence | MSKYLDKAFD LQGRCAIVTG GAAGIGLACA RLLTECGARV ALLDRNPAVE TVAAGLGSGH LGVALDVRQL DEIQAAVERV VAAFGQIDYL VNSAGVARLD KALDVDEESW DITLDINLKA SFFAAQAVAR HMRERGAGRI VNLASQAAVI GLDRHAAYCA SKAAIVGLTK VLAMEWAEHG ITVNAVSPTI VETELGKQAW AGEVGERAKQ QIPVGRFAQP EEVASLVLYL LSDAAAMITG ENVVIDGGYT IK
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