Gene Avin_21820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_21820 
Symbol 
ID7761101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2180197 
End bp2180907 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content69% 
IMG OID643805068 
ProductExbB proton channel 
Protein accessionYP_002799349 
Protein GI226944276 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.129559 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCTGC TCGGCAACCC CTTCGCCTCG GTCGAACATG TCGTCATCTG GGTCTTGATC 
GGCTTTTCCG TCCTCACCTG GGGCCTGGCC CTGATCAAGA CCATCCAGTT CGCCCGCCTC
GGATACCGCG ACCGCCGGCT GCTGAAACAC TTCTGGCAGG CGCCCAGCCT GGACAGCGCC
GCCGAACTGG TCCAGCGCCA GGCCAGCGCC GTGGCCCATG TCGCCCAGGC CGGCTTCGCC
GCCATCCGGG AGGAGCCCGG CCAGCACGAC CTGGCCCATT CGATCAACCA CCAGGACCGC
CTCGAACGGG CCCTGCGCCA GCAGATCCAG CGCGAGCGCC GCTCCCTGGA GTCCGGCCTG
GCGGTGGTCG CCTCGATCGG CTCCACCTCC CCCTTCATCG GCCTGTTCGG CACCGTCTGG
GGCATCATGG AAGCGCTCAA GGGCATCAGC GCCGCCGGCT CGGCCAGCCT GGAAACCGTC
GCCGGCCCGA TCGGCGCCGC CCTGGTCGCC ACCGGCGTGG GGATCGCCGT CGCGGTGCCC
GCCGTGCTGG TCTACAACTA CTTCCTGCGC CGCCTGAAGC TGACCGCCGC GGACCTCGAC
GACTTCGCCC ACGACTTCTA CAGCCTGGCG CAGAAGAGCG CCTTCAAGCT GATCCCGTAT
CCGCGCGCCG GCCGGAGCCA GGGTGTCCAG CACGTCAAGG AGGCGATCTG A
 
Protein sequence
MDLLGNPFAS VEHVVIWVLI GFSVLTWGLA LIKTIQFARL GYRDRRLLKH FWQAPSLDSA 
AELVQRQASA VAHVAQAGFA AIREEPGQHD LAHSINHQDR LERALRQQIQ RERRSLESGL
AVVASIGSTS PFIGLFGTVW GIMEALKGIS AAGSASLETV AGPIGAALVA TGVGIAVAVP
AVLVYNYFLR RLKLTAADLD DFAHDFYSLA QKSAFKLIPY PRAGRSQGVQ HVKEAI