Gene Avin_21600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_21600 
Symbol 
ID7761081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2160119 
End bp2160973 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content66% 
IMG OID643805049 
Productaliphatic sulfonates ABC transporter, inner membrane component 
Protein accessionYP_002799330 
Protein GI226944257 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGGAA AAATCAACGG ATCGTTATTT CCGGCGGGCC GGCTCTCACG GCAATGGATC 
GGCGATCGCC TGGCCAGGTA CGGCGCAGGC TGGAAAACGC CCGATTTCGC CCGGCGCCTG
GCCAGTCCGC TGGCCATCCT GCTGCTCTGG GAACTGGCCG CGCAGACGGG GCTGATTCCG
GCCCGGGTGA TCGCGGCCCC CAGCGCCATC GGCGAGACGC TCTGGGCGAT GATCGCCAGC
GGCGAGCTGG GCAGGCATCT GGCGGTCTCG CTGCAGCGGG CCGTGTCGGG CCTGGCCATC
GGCGTCGGCA TCGGTACCGT GGCGGCGCTG ATCAGCGGCC TGTCCAGGCG CGGCGAACTC
GTCCTGGACT CGCCCATGCA GATGCTCAGG ACGGTGCCGT CGCTGGCGCT GGTGCCCCTG
TTCATCCTGT GGTTCGGCAT CGGCGAGTTC ACCAAGATCG CCCTGATCGT GATGGGCACG
ACCTTTCCGG TGTACCTGAA CCTGTTCGCC GGCATTCGCA ACATCGATCC CAAGCTGGTC
GAGGCCGCCA ATACCCTGGG CCTGAACCGC CGGGAACTGA TCTGGCACGT GATCCTGCCC
GGCGCCCTGC CGTCCTTCTT CGTCGGGCTG CGCTACTCGC TGGGCATTTC CTGGCTGGCC
CTGGTGTTCG TCGAGCAGAT CAACGCTACC GCCGGCATCG GCTTCCTGGC CAGCGATGCG
CGGGATTTCA TGCGCACCGA TGTCATCGTC ATCTGCCTGC TCATCTATAG CGTGCTGGGG
CTGCTGATCG ACGGGTTGAT CCGCACCCTC GAACGCTTCG CCCTGGCTTG GCGTCCTTCT
TTCGTCGGGA ATTGA
 
Protein sequence
MTGKINGSLF PAGRLSRQWI GDRLARYGAG WKTPDFARRL ASPLAILLLW ELAAQTGLIP 
ARVIAAPSAI GETLWAMIAS GELGRHLAVS LQRAVSGLAI GVGIGTVAAL ISGLSRRGEL
VLDSPMQMLR TVPSLALVPL FILWFGIGEF TKIALIVMGT TFPVYLNLFA GIRNIDPKLV
EAANTLGLNR RELIWHVILP GALPSFFVGL RYSLGISWLA LVFVEQINAT AGIGFLASDA
RDFMRTDVIV ICLLIYSVLG LLIDGLIRTL ERFALAWRPS FVGN