| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_20730 |
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| Symbol | |
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| ID | 7760998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 2062207 |
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| End bp | 2063229 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643804968 |
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| Product | dTDP-4-dehydrorhamnose reductase, RmlD |
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| Protein accession | YP_002799249 |
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| Protein GI | 226944176 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR03466] hopanoid-associated sugar epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.989981 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCCATCG GCACCCGAAT CAAAGATTAT TCTGATGGTA ATGTCGTGAA GATATTAGTA
ACCGGAGCCA CCGGTTTTGT CGGTTCGGCC GTGGTGCGTC GTCTCCTGCG CGATGATCAT
CATGTGCGCG TGCTGGTGCG AGCCAGTTCG GATCGTCGCA ACCTGCAAGA TTTAAACGTG
CAGGTTGTCG AAGGAGATCT CACCCAGGCG GCTTCATTGC AACACGCTTG TGACGGCTGC
GATGCCCTGT TCCACGTGGC AGCCGATTAC AGGCTGTGGG CGCCGTTTCC CGAACAACTC
TACCGTACCA ACGTCGAGGG CACGCGCGTC ATACTCGAGG CTGCCAAGTC GGCAGGCGTG
CCACGTATCG TCTATACCAG CAGCGTCGCT ACCCTTGGCA TCCCCAAGGA CGGCCGTCCT
GGCGACGAGA ACACGGCCGT GACAGAGCGT GACATGATCG GACACTACAA GCGCTCCAAG
TTTCTCGCCG AGTCGCTGGT CAGGGAGTTC GCCGCCGAGG GCCTGCCAGT GGTGATCGTC
AATCCTTCGA CCCCGATCGG GCCGCGCGAC ATCAAACCCA CCCCCACTGG CCGGATCGTG
CGCGATGCCA TTGCCGGTCG CCTGCCTGCC TATGTCGACA CCGGTCTCAA TATCGTGCAT
GTGGACGATG TAGCCGAAGG ACACTGGCTA GCGTTCCAGC ACGGTGTCGT AGGCGAGCGC
TACATTCTGG GCGGGCAGAA TCTCACCTTG CGCGAGATGC TCGCCGAGAT CGCCGACATT
GCCGGGCTCG CGCCGCCCCG CTGGAGACTG CCGCACGCAG CGGTCATGCC CATAGCCCAC
CTTGCGGAGG TTTGGGCACG CCTGAGCGGA ACCCAGCCGA TCGCGACGGT GGAAGAGGTA
CGCATGTCCA GGAAATACAT GTTCTTCTCC AGCGCCAAAG CCGAACGCGA ACTCGGCTAT
ACACCGGGGC CCGTCCGCCT GGCGATGGAG GATGCAGTGA TGTGGTTCAG ACAGCACCGC
TAG
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| Protein sequence | MPIGTRIKDY SDGNVVKILV TGATGFVGSA VVRRLLRDDH HVRVLVRASS DRRNLQDLNV
QVVEGDLTQA ASLQHACDGC DALFHVAADY RLWAPFPEQL YRTNVEGTRV ILEAAKSAGV
PRIVYTSSVA TLGIPKDGRP GDENTAVTER DMIGHYKRSK FLAESLVREF AAEGLPVVIV
NPSTPIGPRD IKPTPTGRIV RDAIAGRLPA YVDTGLNIVH VDDVAEGHWL AFQHGVVGER
YILGGQNLTL REMLAEIADI AGLAPPRWRL PHAAVMPIAH LAEVWARLSG TQPIATVEEV
RMSRKYMFFS SAKAERELGY TPGPVRLAME DAVMWFRQHR
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