Gene Avin_20640 details

Gene Information

• Locus tag: Avin_20640
• Symbol: idi
• ID: 7760990
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: -
• Start bp: 2054438
• End bp: 2055079
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 643804961
• Product: isopentenyl-diphosphate delta-isomerase, type 1
• Protein accession: YP_002799242
• Protein GI: 226944169
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG1443] Isopentenyldiphosphate isomerase
• TIGRFAM ID: [TIGR02150] isopentenyl-diphosphate delta-isomerase, type 1

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGGTTC TGCGCTATGA TGCCGAAGCT CGATTCGTTG AGGAGATTAG TTTGATTAAT 
CAAGAACAGG GCTCTTGCCA ATGGCGTCAG TTGAGAAACG AAGTTTCCTT CAATGACGAG 
CCGCTGGTAC TGGTCGACGC GCATGACCGG GAGATTGGCT TTCTCGACAA GGCATCCGCG 
CACCAGGGGC AGGGTTTGCT GCATCGGGCC TTTTCATTGT TTGTGTTCAA TCGTCGAGGT 
GAATTGCTGC TGCAGCAACG CGCAGCCGGC AAGCGCCTGT GGCCCGGCTT CTGGTCCAAT 
ACTTGCTGCA GCCACCCACG CCGTGGCGAG ACGCTGGACG AAGCTGTCGA GCGGCGTCTC 
AATGAGGAAC TGAGCATGCA GTGCAAACTG CAGTTTCTGT TCAAGTTCGA ATATCAGGCA 
CAATTCGATG CCGAAGGCGC CGAGCACGAG TTATGCTCGG TCTATGCCGG ACGCAGCGAC 
GAGGCCCCCA GCCTCAACCT CAACGAGGTT TCGGCACTGC GCTACATTTC TCCGGAAGCG 
TTGGATGCGG AAATGGCGGA GCACCCACAA AGGTTCACGC CCTGGTTCAA GATCGAATGG 
GAACGTCTGC GCCGGGAATA CACCGAAGTA TTCGCCCTCT GA 

 

Protein sequence

MEVLRYDAEA RFVEEISLIN QEQGSCQWRQ LRNEVSFNDE PLVLVDAHDR EIGFLDKASA 
HQGQGLLHRA FSLFVFNRRG ELLLQQRAAG KRLWPGFWSN TCCSHPRRGE TLDEAVERRL 
NEELSMQCKL QFLFKFEYQA QFDAEGAEHE LCSVYAGRSD EAPSLNLNEV SALRYISPEA 
LDAEMAEHPQ RFTPWFKIEW ERLRREYTEV FAL