Gene Avin_20110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_20110 
SymbolgltX 
ID7760940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1999742 
End bp2001223 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content65% 
IMG OID643804909 
Productglutamyl-tRNA synthetase 
Protein accessionYP_002799192 
Protein GI226944119 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID[TIGR00464] glutamyl-tRNA synthetase, bacterial family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACCG TCCGCACCCG CATCGCGCCG TCGCCCACCG GCGATCCGCA CGTCGGCACC 
GCCTACATCG CCCTGTTCAA CCTGTGTTTC GCCCGTCAGC ACGGCGGCCA GTTCATCCTG
CGCATCGAGG ACACCGACCA GTTGCGCTCG ACCCGCGAAT CGGAGCAGCA GATCTACGAC
GCCCTGCGCT GGCTGGGCAT CGAATGGGAC GAGGGCCCGG ACGTCGGCGG CCCACACGGG
CCGTACCGGC AGAGCGAGCG CGGCGAGATC TATAAAAAGT ATTCGGACGA ACTGGTCGCC
AAGGGCCATG CCTTCCCCTG TTTCTGCAGC GCCGAGCGGC TCGACGAGGT GCGCGCGCGG
CAGATGGCCA ACAAGGAAAC CCCGCGCTAC GACGGCCACT GCGTGCATAT CGCCGCGGAG
GAGGCGCAGC GCCGCATCGC CGCCGGCGAA TCCCACGTGG TGCGCATGAA GGTGCCGAGC
GAGGGCGTCT GCACGGTACC GGACCTGCTG CGCGGCGACG TGGAGATTCC CTGGGACCGC
ATGGACATGC AGGTGCTGAT GAAGGCCGAC GGCCTGCCCA CCTACTTCCT CGCCAACGTG
GTCGACGACC ACCTGATGGG CATCACCCAC GTGCTGCGCG GCGAGGAGTG GCTGCCCTCG
GCGCCCAAGC TGATCAAGCT CTACGAGTAC TTCGGCTGGG AGCAGCCCAG GCTGGTGTAC
ATGCCGCTGC TGCGCAATCC GGACAAGAGC AAGCTGTCCA AGCGCAAGAA CCCCACCTCG
ATCACCTTCT ACCAGCGCAT GGGCTTTTTG CCCGAGGCGA TGCTCAACTA CCTGGGCCGC
ATGGGCTGGT CGATGCCCGA CGAGCGCGAG AAGTTCACCC TGGCGGAGAT GATCGAGCAC
TTCGACATCC AGCGCGTCTC CCTCGGCGGG CCGATCTTCG ACATGGAGAA GCTTTCCTGG
CTGAACGGCC AGTGGCTGCG CGAACTGCCG GTCGAGGCAT TCGCCGCCGA GGTGCGCAAA
TGGGCGTTCA ATCCCGAGTA CCTGATGAAG ATCGCCCCGC ACGTGCAGAG CCGGGTGGAA
ACCTTCAGCC AGATCGCCCC GCTGGCCAGT TTCTTCTTCG CCGGCGGCGT ACCGCTGGAC
GCCCGCTTGT TCGAGCACAA GAAACTCTCG GCCGAGCAGG TCCGCCAGTT GCTGCAACTG
ATCCTCTGGA AGCTGGAAGC CCTGCGCCAG TGGAACAAGG ACAACATCAC CGCGATCATC
CAGAAGACCA GCGAGCACCT CGGCTACAAG CTGCGCGATG CCATGCCGCT GATCTTCCCA
GCGATCACCG GCCAGGCCAG TTCGGTGTCG GTGCTGGACG CCATGGAAAT CCTCGGCGCC
GACCTGACCC GCTTCCGTCT GCGCCAGGCC ATCGAGCTAC TCGGCGGTGT TTCGAAGAAG
GAAAACAAGG AATGGGAGAA GCTGCTGGCC GAGATTCCCT GA
 
Protein sequence
MTTVRTRIAP SPTGDPHVGT AYIALFNLCF ARQHGGQFIL RIEDTDQLRS TRESEQQIYD 
ALRWLGIEWD EGPDVGGPHG PYRQSERGEI YKKYSDELVA KGHAFPCFCS AERLDEVRAR
QMANKETPRY DGHCVHIAAE EAQRRIAAGE SHVVRMKVPS EGVCTVPDLL RGDVEIPWDR
MDMQVLMKAD GLPTYFLANV VDDHLMGITH VLRGEEWLPS APKLIKLYEY FGWEQPRLVY
MPLLRNPDKS KLSKRKNPTS ITFYQRMGFL PEAMLNYLGR MGWSMPDERE KFTLAEMIEH
FDIQRVSLGG PIFDMEKLSW LNGQWLRELP VEAFAAEVRK WAFNPEYLMK IAPHVQSRVE
TFSQIAPLAS FFFAGGVPLD ARLFEHKKLS AEQVRQLLQL ILWKLEALRQ WNKDNITAII
QKTSEHLGYK LRDAMPLIFP AITGQASSVS VLDAMEILGA DLTRFRLRQA IELLGGVSKK
ENKEWEKLLA EIP