Gene Avin_20090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_20090 
SymboltyrB 
ID7764122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1996152 
End bp1997348 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content67% 
IMG OID643804907 
Productaromatic amino acid aminotransferase 
Protein accessionYP_002799190 
Protein GI226944117 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1448] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTGT TCTCTGCCGT AGAAATGGCA CCGCGTGACC CGATCCTTGG CCTCACCGAA 
GCATTCAATG CCGATATCCG TCCGACCAAG GTCAACCTCG GCGTCGGCGT CTACTACAAC
GAAGAGGGTC GAATTCCCCT GCTGCGCGCC GTCGAGGAAG CCGAAAAGGC TCGCATCGCC
GCCCATGCAC CGCGCGGCTA CCTGCCGATC GAGGGCATCG GTGCCTACGA CCAGGCGGTG
CAGAGGCTGC TGTTCGGCAA CGACTCCGCC CTGCTCGCCG ACGGCCGTGT GGTCACCGCT
CAGGCGCTGG GCGGCACCGG CGCGCTGAAG GTCGGCGCCG ACTTCCTCAA GCGCCTGCTG
CCGGATGCCG TGGTCGCCAT CAGCGACCCG AGCTGGGAGA ACCACCGCGC CCTGTTCGAG
TCCGCCGGCT TCCGCGTGCA GAGCTACCGC TACTACGACG CCGCCGGCCA CGGCCTGAAC
CGCGCCGGCA TGCTCGAAGA CATCCGGGCC CTGCCGGCCG GCTCCATCGT GCTGCTGCAC
GCCTGCTGCC ACAACCCGAC CGGCGTCGAT CTGTCCATCG ATGACTGGAA GCAGGTGCTG
GAGGCGATCC GCGAACGCGG CCATGTCCCC TTCCTCGACA TCGCCTACCA GGGCTTCGGC
GACAGCATCG AGGAAGATGC CGCGGCGGTT CGCCTGTTCG CCGGCTCGGA CCTGCAGTTC
TTCGTCTCCA GCTCCTTCTC CAAGTCCTTC TCCCTCTACG GCGAACGGGT CGGCGCCCTG
TCCATCGTCG CCGCCTCGAA GGACGAGGCG GCTCGCGTGC TGTCGCAGAT CAAGCGGGTG
ATCCGCACCA ACTATTCGAA CCCGCCGACC CACGGCGCCA GCGTGGTGTC CAGCGTGCTC
AACAGTCCGG AACTGCGCGC CCTGTGGGAA AGCGAACTGG CCGAGATGCG CGGCCGCATC
CAGAGCATGC GCCAGGCCAT GGTCGAGCAA CTGGCCGCCC AGGGCGCCAA GCGCGACTTC
TCCTTCGTCG CCCGGCAGCG TGGCATGTTC TCCTACTCCG GTCTCAGCGT CGCGCAGGTG
GAACGGCTGC GCACCGAGTT CGGCATCTAC GCCGTCGCCA CCGGCCGCAT CTGCGTCGCC
GCCCTGAACC AGCGCAACAT CGCCAGCGTC ACCCAGGCCA TCGCTCAGGT GCTCTGA
 
Protein sequence
MSLFSAVEMA PRDPILGLTE AFNADIRPTK VNLGVGVYYN EEGRIPLLRA VEEAEKARIA 
AHAPRGYLPI EGIGAYDQAV QRLLFGNDSA LLADGRVVTA QALGGTGALK VGADFLKRLL
PDAVVAISDP SWENHRALFE SAGFRVQSYR YYDAAGHGLN RAGMLEDIRA LPAGSIVLLH
ACCHNPTGVD LSIDDWKQVL EAIRERGHVP FLDIAYQGFG DSIEEDAAAV RLFAGSDLQF
FVSSSFSKSF SLYGERVGAL SIVAASKDEA ARVLSQIKRV IRTNYSNPPT HGASVVSSVL
NSPELRALWE SELAEMRGRI QSMRQAMVEQ LAAQGAKRDF SFVARQRGMF SYSGLSVAQV
ERLRTEFGIY AVATGRICVA ALNQRNIASV TQAIAQVL