Gene Avin_20050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_20050 
Symbol 
ID7760935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1993952 
End bp1995013 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content69% 
IMG OID643804903 
Productputative RNA 2'-O-ribose methyltransferase 
Protein accessionYP_002799187 
Protein GI226944114 
COG category[R] General function prediction only 
COG ID[COG2933] Predicted SAM-dependent methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGCC TGTTGTTGCA TTGCCGTCCC GGTTTCGAAG GCGAAGTCTG CGCCGAGATC 
GGCGAGCACG CCGGACGCCT GAACGTGGCC GGCTATGCCA GGGCCAAGCC GAACAGCGCC
CATGCCGAAT TCGTCTGCAG CGAGCCGGGC GGCGCCGAGC GACTGATGCG CGAGCTGCGC
TTCGCCGGGC TGGTCTTTCC CCGCCAGTGG GCACGTGGCG CTTTCGTCGA GCTGCCCGAG
AGCGAGCGCA TTGGCGTCCT GCTCGAGCAC CTGGCCGCTT ACCCGGTCTG CGGCAGCCTC
TGGCTGGAGG TGCTGGACAG CAACGAGGGC AAGGAGCTGT CGACCTTCTG CCGCAAGTTC
GAGGTGCCGC TGCGCAAGGC GCTGGGCAAG ACCGGCAGAT TGCTGGACGA TCCGCGCCGG
CCGCGCCTGC TGCTGACCTT CAGGAGTGGC CGCGAGGTTT TCCTCGGCCT GGCCGAACCG
GACAACTCGG CAGCCTGGCC GATGGGCATC CCGCGCCTGA AGTTTCCCCG CGAGGCGCCG
AGCCGTTCGA CCCTCAAGCT GGAGGAGGCC TGGCACCAGT TCATTCCACG CGAGGCCTGG
GATCTGCGTC TCGCGCCGGG GATGAGCGCC GTGGACCTCG GCGCCGCGCC CGGTGGCTGG
ACCTGGCAAC TGGTCAACCG CCATATGAAG GTGACCGCCG TGGATAACGG GCCGATGGCG
CAGAGCCTGA TGGATTCCGG ACTGGTCGAG CACGTTCGCG CCGATGGTTT CGTTTTCCGC
CCGCGCCGGC CGGTCGACTG GATGGTCTGC GACATCGTCG AGAAGCCCGC CCGCACGGCC
GCCCTGATCG AGACCTGGCT CGGCGAGGGG CTCTGCCGCG AGGCGGTGGT CAACCTCAAG
CTGCCGATGA AGCAGCGCCA TGCCGAGGTG CGCCGCCTGC TCGAGCGCAT CCGCGATGGT
CTGAGCGCAC GGGGCGCCAA GGTGTCCGTC GCCTGCCGCC AGCTCTACCA CGATCGCGAG
GAAGTGACCT GTCATCTGTG TCGGCTACCG GCCCCGGCGT GA
 
Protein sequence
MNSLLLHCRP GFEGEVCAEI GEHAGRLNVA GYARAKPNSA HAEFVCSEPG GAERLMRELR 
FAGLVFPRQW ARGAFVELPE SERIGVLLEH LAAYPVCGSL WLEVLDSNEG KELSTFCRKF
EVPLRKALGK TGRLLDDPRR PRLLLTFRSG REVFLGLAEP DNSAAWPMGI PRLKFPREAP
SRSTLKLEEA WHQFIPREAW DLRLAPGMSA VDLGAAPGGW TWQLVNRHMK VTAVDNGPMA
QSLMDSGLVE HVRADGFVFR PRRPVDWMVC DIVEKPARTA ALIETWLGEG LCREAVVNLK
LPMKQRHAEV RRLLERIRDG LSARGAKVSV ACRQLYHDRE EVTCHLCRLP APA