Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_19630 |
Symbol | livM |
ID | 7760895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 1953925 |
End bp | 1955181 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643804863 |
Product | leucine/isoleucine/valine transporter permease subunit |
Protein accession | YP_002799147 |
Protein GI | 226944074 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000188502 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCCCC GACTGAAGAC CGCCCTGTTC AGCGCCCTGC TGGTGCTCGC CGTGGCCTGG CCGGTGCTCG GCCTCAGGCT GACCACCGTC GGTATCCGCC TGGAAGTGCA CAACGCCAGC CCGGCGCTGC TCTGCAGCAT CGCCGCCGCG GCCGTCGGCA TGTTCTGCTG GCAACTCTGG CGCGACCGCC TCGCCGTGCT CTGGAGCGGA GCGCCGCGAC CTCCCGGCGT GCCGAACCGG CTGAAGGACA TCCTCACCCG CCCCGCGACC CAGCGCTGGG GCGTGCTCGC CCTGCTGCTG CCGGCCCTGG TCTGGCCGTT CCTCGCCTCG CGTGGCGCCG TGGACCTGGC CACCCTGATC CTCATCTACG CCATGCTGGG ACTCGGCCTG AACATCGTGG TCGGCCTCGC CGGCCTGCTC GATCTCGGTT ACGTCGGCTT CTACGCGGTC GGCGCCTACA CCTACGCCCT GCTCTCGCAG CACTTCGGCC TGGGCTTCTG GACCTGCCTG CCGATCGCCG GGGCGATGGC CGCGCTGTTC GGCTTCCTGC TCGGCTTTCC GGTGCTGCGC CTGCGCGGTG ACTACCTGGC CATCGTCACC CTGGGCTTCG GCGAGATCAT CCGCATCCTG CTGCGCAACC TCACCGAACT CACCGGCGGT CCCAACGGCA TCGGCGGCAT CGACAGGCCG ACTTTCTTCG GCCTGACCTT CGAGCGCCGC GCCCCGGAGG GCCTGCAGAC CTTCCACGGC TTCTTCGGCC TGCCCTACGA CTCGGCGGAC AAGGTGATCT TCCTCTACCT GATCGCCCTC TCGCTGGTGC TGCTCACCCT GTTCGTCATC AATCGCCTGC TGCGCATGCC GATCGGCCGT GCCTGGGAAG CCCTGCGCGA GGACGAGATC GCCTGCCGCG CGCTGGGCCT CAACCCCACC GCCATCAAGC TCTCGGCCTT CACCCTCGGC GCCTGCTTCG CCGGATTCGC CGGCAGCTTC TTCGCCGCCC GCCAGGGGCT GGTGACGCCG GAGTCCTTCA CCTTCATCGA GTCGGCGGTG ATCCTCGCCA TCGTCGTGCT GGGCGGCATG GGCTCGCAAC TGGGGGTGAT CCTCGCCGCG ATGGTGATGA TCCTGCTTCC CGAACTGATG CGCGAGTTCA GCGAGTACCG CATGCTGCTG TTCGGCGCCC TGCTGGTGCT GATGATGGTC TGGCGGCCGC AGGGCCTGTT GCCCATGCAG CGTCCGCACC TGGAGCTGAA ACCATGA
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Protein sequence | MSPRLKTALF SALLVLAVAW PVLGLRLTTV GIRLEVHNAS PALLCSIAAA AVGMFCWQLW RDRLAVLWSG APRPPGVPNR LKDILTRPAT QRWGVLALLL PALVWPFLAS RGAVDLATLI LIYAMLGLGL NIVVGLAGLL DLGYVGFYAV GAYTYALLSQ HFGLGFWTCL PIAGAMAALF GFLLGFPVLR LRGDYLAIVT LGFGEIIRIL LRNLTELTGG PNGIGGIDRP TFFGLTFERR APEGLQTFHG FFGLPYDSAD KVIFLYLIAL SLVLLTLFVI NRLLRMPIGR AWEALREDEI ACRALGLNPT AIKLSAFTLG ACFAGFAGSF FAARQGLVTP ESFTFIESAV ILAIVVLGGM GSQLGVILAA MVMILLPELM REFSEYRMLL FGALLVLMMV WRPQGLLPMQ RPHLELKP
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