Gene Avin_19270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_19270 
SymbolrnfA 
ID7760861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1921435 
End bp1922019 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content62% 
IMG OID643804829 
ProductNa(+)-translocating NADH-quinone reductase subunit E 
Protein accessionYP_002799113 
Protein GI226944040 
COG category[C] Energy production and conversion 
COG ID[COG4657] Predicted NADH:ubiquinone oxidoreductase, subunit RnfA 
TIGRFAM ID[TIGR01943] electron transport complex, RnfABCDGE type, A subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.557137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAAC TCGTCCTGAT CCTGGTTGGC GCCATCCTGG TCAACAACTT CGTGCTGGTG 
CAGTTTCTCG GCCTCTGTCC GTTCATGGGC GTGTCGAAGC GGATCGAGAC GGCCATCGGC
CTCGCCCTGG CCACCACCTT CGTGCTGACC CTGGCGGCCA TGTGCAGCTA TCTGCTGCAA
CGGTACGTGC TCGTGCCGCT GGATCTGGAA TACCTGCGCA CCATCGGTTT CATCCTGGTG
ATCGCCGTGG TGGTGCAGTT CACCGAAATG CTGGTGAACA AGACCAGTCC GTTGCTCTAC
CGTGTTCTGG GCATCTTCCT GCCGCTGATC ACCACCAACT GCATCGTCCT CGGCGTGGCC
CTGCTCAACG CCAACAAGGC GGGTTACGGC TTCCTCGAGT CCGGCATCAA CGGCTTCGGC
GCCGGCCTCG GTTTTTCCCT GGTGCTGGTG CTGTTCGCCG CCATGCGCGA GCGCATCGCC
ATCGCCGACG TGCCCAAACC CTTCAAGGGC GCGGCCATCG GCCTGATCAC CGCCGGCCTG
ATGTCCCTGG CCTTCATGGG CTTTTCCGGA TTGATCAAGC CATGA
 
Protein sequence
MTELVLILVG AILVNNFVLV QFLGLCPFMG VSKRIETAIG LALATTFVLT LAAMCSYLLQ 
RYVLVPLDLE YLRTIGFILV IAVVVQFTEM LVNKTSPLLY RVLGIFLPLI TTNCIVLGVA
LLNANKAGYG FLESGINGFG AGLGFSLVLV LFAAMRERIA IADVPKPFKG AAIGLITAGL
MSLAFMGFSG LIKP