Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_19270 |
Symbol | rnfA |
ID | 7760861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 1921435 |
End bp | 1922019 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643804829 |
Product | Na(+)-translocating NADH-quinone reductase subunit E |
Protein accession | YP_002799113 |
Protein GI | 226944040 |
COG category | [C] Energy production and conversion |
COG ID | [COG4657] Predicted NADH:ubiquinone oxidoreductase, subunit RnfA |
TIGRFAM ID | [TIGR01943] electron transport complex, RnfABCDGE type, A subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.557137 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGAAC TCGTCCTGAT CCTGGTTGGC GCCATCCTGG TCAACAACTT CGTGCTGGTG CAGTTTCTCG GCCTCTGTCC GTTCATGGGC GTGTCGAAGC GGATCGAGAC GGCCATCGGC CTCGCCCTGG CCACCACCTT CGTGCTGACC CTGGCGGCCA TGTGCAGCTA TCTGCTGCAA CGGTACGTGC TCGTGCCGCT GGATCTGGAA TACCTGCGCA CCATCGGTTT CATCCTGGTG ATCGCCGTGG TGGTGCAGTT CACCGAAATG CTGGTGAACA AGACCAGTCC GTTGCTCTAC CGTGTTCTGG GCATCTTCCT GCCGCTGATC ACCACCAACT GCATCGTCCT CGGCGTGGCC CTGCTCAACG CCAACAAGGC GGGTTACGGC TTCCTCGAGT CCGGCATCAA CGGCTTCGGC GCCGGCCTCG GTTTTTCCCT GGTGCTGGTG CTGTTCGCCG CCATGCGCGA GCGCATCGCC ATCGCCGACG TGCCCAAACC CTTCAAGGGC GCGGCCATCG GCCTGATCAC CGCCGGCCTG ATGTCCCTGG CCTTCATGGG CTTTTCCGGA TTGATCAAGC CATGA
|
Protein sequence | MTELVLILVG AILVNNFVLV QFLGLCPFMG VSKRIETAIG LALATTFVLT LAAMCSYLLQ RYVLVPLDLE YLRTIGFILV IAVVVQFTEM LVNKTSPLLY RVLGIFLPLI TTNCIVLGVA LLNANKAGYG FLESGINGFG AGLGFSLVLV LFAAMRERIA IADVPKPFKG AAIGLITAGL MSLAFMGFSG LIKP
|
| |