Gene Avin_19210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_19210 
Symbol 
ID7760855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand- 
Start bp1915670 
End bp1916308 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content55% 
IMG OID643804823 
Productendonuclease III/Nth 
Protein accessionYP_002799107 
Protein GI226944034 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.24401 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCAG ACAAACGCCG GGAAATCTTT CGCCGTTTTC AGGAAGACAA CCCAACCCCT 
ACAACGGAAT TACTCTATAG CAGCCCTTTC GAACTGCTGA TCTCGGTGAT TCTCTCCGCT 
CAAGCCACCG ATGTCAGTGT GAACAAGGCG ACCGCCAGAC TCTTTCCGGT GGCGAACACT 
CCGGAAGCCA TACTCTCCTT GGGCGTAGAA GGCCTGAGCG AATACATCAA GAGCATCGGC 
TTGTTCAACA GCAAGGCCAA AAACATCATC GAGACGTGTC GCATCCTCAT CGAGAAGCAC 
GACAGTCAGG TTCCGGACAA TCGAGAAGCT CTGGAAGCGC TGCCTGGAGT CGGTCGCAAG 
ACAGCCAATG TGGTGCTCAA CACGGCCTTC CGCCACTTCA CCATGGCAGT GGATACGCAT 
ATCTTCCGAG TCAGCAACCG CACTCGCCTC GCACCAGGCA AGAACGTGCT GGAAGTCGAA 
CGCAAGCTCG TCAGACTGGT GCCCAAGGAG TATCTCCTGG ACGCCCACCA CTGGCTGATC 
CTGCATGGTC GCTATGTGTG CAAGGCCCGC AAGCCACTGT GTGGCAGTTG CCGCATCGAA 
GACCTGTGCG AGTACAAACA CAAGACATCC GACGATTAA
 
Protein sequence
MNADKRREIF RRFQEDNPTP TTELLYSSPF ELLISVILSA QATDVSVNKA TARLFPVANT 
PEAILSLGVE GLSEYIKSIG LFNSKAKNII ETCRILIEKH DSQVPDNREA LEALPGVGRK 
TANVVLNTAF RHFTMAVDTH IFRVSNRTRL APGKNVLEVE RKLVRLVPKE YLLDAHHWLI 
LHGRYVCKAR KPLCGSCRIE DLCEYKHKTS DD