Gene Avin_19110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_19110 
Symbol 
ID7760845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand+ 
Start bp1897307 
End bp1897906 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content66% 
IMG OID643804809 
ProductAcyl-carrier protein phosphodiesterase 
Protein accessionYP_002799098 
Protein GI226944025 
COG category[I] Lipid transport and metabolism 
COG ID[COG1182] Acyl carrier protein phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCGTG TTCTGGTCAT CGAAAGCAGC GCCCGTCAGG AAGGTTCCGT TTCCCGCCAA 
CTCACCGCAG AGTTCCTGGC TCGCTGGAAG GCGGCGCACC CGAACGACGA GATCGTCGTG 
CGCGATCTGG CGAACGAGCC GGTGCCGCAT CTGGATATCG ATCTGCTGGG CGGCTGGACC 
AAGCCCGCCG AACAGCAGAG CGAGGCGGAG AAGGCGGCGC TGGCGCGTTC CGAGCGACTG 
ACCGGGGAAC TGCTCGGCGC CGATGTGCTG GTGCTGGCGG CGCCCATGTA CAACTTCGCG 
ATTCCCAGCA CCCTGAAGGC CTGGCTCGAT CACGTGCTGC GCGCCGGGGT GACCTTCAAG 
TACACCGAGA ACGGCCCGCA GGGCCTGCTG AGCGGCAAGC GTGCCTTCGT GCTGACCGCT 
CGCGGCGGCA TCTACGCCGG CAGCCCCCTG GATCATCAGG AGCCCTATCT GCGCCAGGCG 
CTGGGGTTCA TCGGTATCCA TGACGTCAGT TTCATCCATG CCGAAGGACT GAACATGGGC 
GGCGATTTCC AGCAGAAGGG CTTGGCCCGG GCCAAGGAGA AGCTGGCCCA GGTAGCCTGA
 
Protein sequence
MSRVLVIESS ARQEGSVSRQ LTAEFLARWK AAHPNDEIVV RDLANEPVPH LDIDLLGGWT 
KPAEQQSEAE KAALARSERL TGELLGADVL VLAAPMYNFA IPSTLKAWLD HVLRAGVTFK 
YTENGPQGLL SGKRAFVLTA RGGIYAGSPL DHQEPYLRQA LGFIGIHDVS FIHAEGLNMG 
GDFQQKGLAR AKEKLAQVA